Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03837 |
Symbol | |
ID | 6775969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4135430 |
End bp | 4137301 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642757288 |
Product | Signal transduction histidine kinase |
Protein accession | YP_002128121 |
Protein GI | 196158632 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACTTA CAGGGTATTG GGCCTACTTA ACGGCGTACG ACTCGGTAAG AGAAAGAGAG TATCAGCTGC TTACTCAAAC GCTCTCGTTA AACGTACTTG AAATCATTGA TGAGCGGCGT GATTTGCTTA TTGAATCTGG CTTAGAGAAC GTGCCGGTAT TTAGGGATGC CTATCAAAAA GAGGTATTTG AAGAATTAAA GTCACTTCAT CAAACCACTG ATAGACACTT CGCAATAACC GATAAAAGCA CTGAAACGGT AATTTTTAGC ACCATGACGC GCCCGTTGGT GCTTGATGTT GAAAACGCCA ATAAGGCTAC CATTGCAAAT CGCAGCGTGG CGTTCGGAGA GTCTAACGTC AACGATGCTG ACGTGCTGTT TGCCTGCGCT GAATTCGCGC CCTGGAATTG GAAAGTTACG ATTTTACAGC CGGCCGATTC GCTTCAATCT TCTTTGTCTA CCATCGCGTC GCTCACCTCT TTAGTTACGT TGTTTGCGGT GGTTATTGTC AGCCTTTTAA TGGGCAAAGT GACGCAAGTC TTTGTGGTAT CTCCCATCGA GAAAATTAAA TCTGCTGCAA GTCGAATTGC TTTAGATCAT AAGAAGGTCA ATATTGACCT ACAGCAAAAT GACGAGTTAG GTCGCCTTGC TAGAGACGTA GAAGCGATGT CTGGTGAGAT TGAGCAGTAT GTTGCACAAG CGCAGCAAGC TAACCGCGCG AAGACCGATT TTCTTGCGGT AATGAGTCAT GAAATACGTA CGCCACTTAA TGGAATACAA GGGCTTGCAA CACTGCTTCT TGATACCCCT TTAACAGAAA AGCAGCATCA ATATGCAAGT GACCTCAAGT CATCAGCCTC AATACTTGCT ACGGTAATTA ACGATGTGCT GGACTTGTCT AAAATTGAAT CGGGTATGTC AGAGATAGAT GTTACTGAGT TTGCTCTTGA TAATATGCTC CGCGATTTGA TTACACTATT AGGTACCAAT GCAAGCGCTA ATAATACAAG GCTTGTTTAT ACCAGCAAAA ATATGGACTC GGTGGCGGTA ACCAGTGACA TCACGAAGCT TCGCCAAATC ATTATTAACT TAGTGAGTAA CGCGATTAAG TTTACTCACA AAGGTACGGT AAGTATCTCT GCCAAACTAA AAAAACCGTC CACAGAAGAG GTGTGCGAAA ACCGTTTGGT GGTTGCCGTC AAAGACACGG GTATTGGTAT TGAACCAGAC CGCTTAGAGC ATATTTTCGA TAAATTTACG CAATCAGACT CTTCAATAAC CCGCGAATAT GGCGGGACCG GGCTTGGGCT TGCCATTGCA AGACAGCTAG CACAGCTGTT AGGTGGTGAT ATTAAGGTCG TTAGTAAAGT TGGCGAAGGG TCGTGCTTTA CGGTTACCGC AAATGTACAG TCTCGATTGA AGGTTGAATC TTCTACGCAT TTAGATGAAG GGCGTGATGT ACAAGGTGCT AGCGTACCAG CGGGGCTAAA AGTTTTGTTA GCAGAAGACA ACGCAATTAA CGCTGTTGTA GCTCAAGCCC TTTTAGAGCA GCTTCAGTGT GACGTTGAGC ATGTTGATAA TGGGTTGAAA GCCACCGCGC GCGTTGAAGA GGGCGGCATA GATGTGGTCT TTATGGATGT GCATATGCCG GTTATGGACG GTATAGAGGC CACTAAGCGC ATTCGAAAGC TTGACGGTAC ACTTGGCCAG ATCCCGGTGA TTGGGCTTAC CGCAGAAGCC TTCAAAGAGC GTCATATCGC ATTTAAAGAA GCGGGTATGG ACGATATTGT AACGAAACCT GTGACTATTG AAGCGTTACA AGAAAGTCTA TTGAAACTGG CGATTGGGCA AGAAGTTACT GATAATAGTT AA
|
Protein sequence | MALTGYWAYL TAYDSVRERE YQLLTQTLSL NVLEIIDERR DLLIESGLEN VPVFRDAYQK EVFEELKSLH QTTDRHFAIT DKSTETVIFS TMTRPLVLDV ENANKATIAN RSVAFGESNV NDADVLFACA EFAPWNWKVT ILQPADSLQS SLSTIASLTS LVTLFAVVIV SLLMGKVTQV FVVSPIEKIK SAASRIALDH KKVNIDLQQN DELGRLARDV EAMSGEIEQY VAQAQQANRA KTDFLAVMSH EIRTPLNGIQ GLATLLLDTP LTEKQHQYAS DLKSSASILA TVINDVLDLS KIESGMSEID VTEFALDNML RDLITLLGTN ASANNTRLVY TSKNMDSVAV TSDITKLRQI IINLVSNAIK FTHKGTVSIS AKLKKPSTEE VCENRLVVAV KDTGIGIEPD RLEHIFDKFT QSDSSITREY GGTGLGLAIA RQLAQLLGGD IKVVSKVGEG SCFTVTANVQ SRLKVESSTH LDEGRDVQGA SVPAGLKVLL AEDNAINAVV AQALLEQLQC DVEHVDNGLK ATARVEEGGI DVVFMDVHMP VMDGIEATKR IRKLDGTLGQ IPVIGLTAEA FKERHIAFKE AGMDDIVTKP VTIEALQESL LKLAIGQEVT DNS
|
| |