| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03787 |
|---|
| Symbol | |
|---|
| ID | 6778704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 4079075 |
|---|
| End bp | 4080037 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642757240 |
|---|
| Product | Co/Zn/Cd efflux system component |
|---|
| Protein accession | YP_002128073 |
|---|
| Protein GI | 196158584 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00228734 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCACC ACCATAGCGC TCGCGATAAT CCTCACTCGC ACAGCCATGA TTTAGAGAAC
GCTGACTCTA CGCGTATAGG CTGGGCTTTT TGGCTTAACT TTACTTTCAC CATTATTGAA
TTTATTGGCG GGTGGTTAAC TAATAGCGTA GCTATTATGG CCGATGCGGT GCATGACTTA
GGTGATACCT TATCTATAGG CTTAGCGTGG TATTTAAGTA AACTAGGTAA GAAGGCATCC
ACTGAAAAGT ACACTTACGG TTTCAAACGC TTGAGCCTAA TGGGGGCCAT GATAAATGGT
GTCATTTTAA TCGTTGGTGC TGTGTGGATA CTTTCTGAAG CTATTCCTCG ACTAGTTAAC
CCAGAAATGC CTGTTACTGA GGGTATGATG GGCTTAGCCG TACTCGGTAT TTTGGTAAAT
GGCCTTGCTG CCTACAAGCT TCACGGCGGG CATTCAACGA ATGAAAAGGT GCTTAACTGG
CATCTCATCG AAGATGCCAT GGGATGGGTA GCTGTTCTTA TCGTTGCTAT TGTACTTCAT
TTTGTAAATT GGCCCATCCT CGACCCTATT TTATCTATCG GATTTACCCT CTTCATACTG
ATTAACGTCA TCAGGTATGT GGTGCAAACT ATGTCGCTAT TTCTTCAGGG AGTGCCTGAT
TTGGCGACAC GTAATGCCAT AAGTAAGCAG CTATTATCAA TTAAACACGT TGAAGAAATA
CATCACGTGC ACTTTTGGTC TTTAGATGGC GAGCAACACG TTCTCACTGC TCATGTGGTA
ATTAATTGCT TAATAGACAA TGAAAAGTTG CGAGCTTTAA AGCAGGAAGT TAATGAGCGG
CTGACCCCGT TTGGTTTATC TCATACCACG ATTGAGTTTG AGCTGCCCGG TGAGCCGTGT
AGAGATGATA AAGACCATTT ACACACCCAT TCACACAGCC ACGCCCATGA AGAAATAAAC
TAA
|
|---|
| Protein sequence | MHHHHSARDN PHSHSHDLEN ADSTRIGWAF WLNFTFTIIE FIGGWLTNSV AIMADAVHDL
GDTLSIGLAW YLSKLGKKAS TEKYTYGFKR LSLMGAMING VILIVGAVWI LSEAIPRLVN
PEMPVTEGMM GLAVLGILVN GLAAYKLHGG HSTNEKVLNW HLIEDAMGWV AVLIVAIVLH
FVNWPILDPI LSIGFTLFIL INVIRYVVQT MSLFLQGVPD LATRNAISKQ LLSIKHVEEI
HHVHFWSLDG EQHVLTAHVV INCLIDNEKL RALKQEVNER LTPFGLSHTT IEFELPGEPC
RDDKDHLHTH SHSHAHEEIN
|
|---|
| |