| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03772 |
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| Symbol | |
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| ID | 6778689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4064970 |
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| End bp | 4065581 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757225 |
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| Product | putative RNA polymerase sigma factor |
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| Protein accession | YP_002128058 |
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| Protein GI | 196158569 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATCG GCACCACGAA TAACAAAGAG AAAATAATGG AACACACACA ACAACGTGTT
GTACACGCCA ATGTGGTGTT CGGTAACAAA AGCGAAAATG AGCTGATATT AAAAGCGAAA
AGTGGCGATA AACACGCGTT TAGAGCACTT TACGATGAGC ATATTGGGCG CGTATACGCA
TTGTGTTATC GGCTTACCGG TGAAAAAGGG ATGGCAGAAG ATGCCGCGCA AGAGGTCTTC
ATTCAGCTTT GGAGAAAACT GAATAACTTT GATGGGCAAA GTCAGTTTTC TACGTGGCTG
CACAGCGTAA CCGCAAACAT CACTATTTCT TACATGCGCA AGCAAAAGGG CTGGGTGCAA
CGCATGTTCA ATTTAGAGAG TAGCGGTATC AGTGAGATGA CAGCACAAAG CAGCAGTACT
GACATAGATT TAGAAGCATT GGTTATTCGC TTTCCCGAAA GGGCAAGAAT GGTGTTCGTA
CTGCACGCCC TTGAAGGTTA CCGCCACGAA GATATTGCAA ATATGTTGAA TATGGCAGTG
GGGTCGAGCA AGGCGCAGTT TTTCCGTGCC AAGCAATTAT TGAAAGGCTT TATGGGAGTC
GATGATGAGT GA
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| Protein sequence | MLIGTTNNKE KIMEHTQQRV VHANVVFGNK SENELILKAK SGDKHAFRAL YDEHIGRVYA
LCYRLTGEKG MAEDAAQEVF IQLWRKLNNF DGQSQFSTWL HSVTANITIS YMRKQKGWVQ
RMFNLESSGI SEMTAQSSST DIDLEALVIR FPERARMVFV LHALEGYRHE DIANMLNMAV
GSSKAQFFRA KQLLKGFMGV DDE
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