| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03729 |
|---|
| Symbol | obgE |
|---|
| ID | 6778186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 4028594 |
|---|
| End bp | 4029772 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642757182 |
|---|
| Product | GTPase ObgE |
|---|
| Protein accession | YP_002128015 |
|---|
| Protein GI | 196158526 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0913386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG TAGATGAAGC TGAAATTCGC GTTGAAGCCG GAGATGGCGG CAACGGTGTA
ATTGGCTTTA GAAGGGAAAA ATACGTACCT AAAGGCGGCC CGGATGGAGG CGACGGTGGT
GACGGCGGCA GTGTATTTTT ACAGGCCGAT GAAAACCTAA ATACATTGAT CGATTATCGC
TTTGAGCGCT TTCACCGCGC TGAACGTGGC CAAAATGGTC AAGGTAGCAA CTGTATCGGT
AAAAAAGGTC AAGACCTTAC GGTTATGGTT CCGGTAGGTA CACGCGCCAC CGACAGCGAT
ACGGGTGAGG TGTTGGGCGA CCTTACACGC CACGGTCAGA AGCTTAAAGT AGCCCAAGGT
GGTTTCCACG GTTTGGGTAA TACGCGATTT AAAAGCAGTA CTAACCGCGC ACCTCGTCAA
AAGACCAATG GCACACCAGG TGAAATTCGC AACCTTAAGC TAGAGCTTAT GCTTCTTGCA
GATGTTGGCT TACTGGGCAT GCCAAATGCG GGTAAATCTA CATTCATTCG CTCTGTCTCT
GCCGCTAAGC CCAAAGTGGC TGATTACCCA TTCACGACGC TTGTGCCTAA CTTAGGTGTG
GTACGTCAAG ACGCGCAACG AAGCTTTGTT GTCGCTGACA TTCCAGGCTT GATAGAAGGC
GCAGCAGACG GCGCTGGCTT AGGTATCCGC TTCTTAAAGC ACTTAGAACG CTGTCGCATA
TTACTTCACG TTGTCGATAT TTTCCCCGTC GATGAAACAG ATCCAGCGGA CAATGCCAAG
GCGATTATTG AAGAGCTCGA AAAATATAGC CCTAAATTGG CCCAAAAGCC TCGCTGGTTA
GTGTTTAACA AAGTTGACTT ACTGCTTGAA GAAGAAGTAG AAGAACGCTG TCAGCACGTT
ATTGATGCGC TAGGTTGGGA AGGGCCGGTG TACCAAATCT CAGCGTTCCA AAAGATGAAC
CTAGACCCGC TTTGTAACGA TGTTATGGAC TTCATCGAAA CCCTTCCCGC TGAAACTGAG
CAGGAAGAAG AGAAGAAAGA AGTCGAATTC AAGTGGGATA CGTACCATAA GAATACCCTT
GAAGCTCACG ATGAGTTTGA AGACGACTTA GGTGATGATC TCGATGATGA TGATTGGGAT
GAAGACGACT ACGACGTAGA AGTTGAGTAT CGTCGCTAA
|
|---|
| Protein sequence | MKFVDEAEIR VEAGDGGNGV IGFRREKYVP KGGPDGGDGG DGGSVFLQAD ENLNTLIDYR
FERFHRAERG QNGQGSNCIG KKGQDLTVMV PVGTRATDSD TGEVLGDLTR HGQKLKVAQG
GFHGLGNTRF KSSTNRAPRQ KTNGTPGEIR NLKLELMLLA DVGLLGMPNA GKSTFIRSVS
AAKPKVADYP FTTLVPNLGV VRQDAQRSFV VADIPGLIEG AADGAGLGIR FLKHLERCRI
LLHVVDIFPV DETDPADNAK AIIEELEKYS PKLAQKPRWL VFNKVDLLLE EEVEERCQHV
IDALGWEGPV YQISAFQKMN LDPLCNDVMD FIETLPAETE QEEEKKEVEF KWDTYHKNTL
EAHDEFEDDL GDDLDDDDWD EDDYDVEVEY RR
|
|---|
| |