| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03727 |
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| Symbol | |
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| ID | 6778241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4026724 |
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| End bp | 4027716 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757180 |
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| Product | sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase |
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| Protein accession | YP_002128013 |
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| Protein GI | 196158524 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGT CAAATAAAGC CTTAGAATCA AAATCTCAAG ATGACTTAGA AGTCATCGAC
ATGCCAGCTG ATATGAAAGC TGACGAAGCC TTGACCAACG ACGCTGAACT AGAAAATGAC
GACGCCATTT TCAGTCAGGA CGACCAACCT AAAAACCTAG ATGCAACACA GCTTTATCTA
GGCGAGATTG GATTTTCACC ACTGCTAACC GCAGAAGAAG AAGTTTATTT TGCGCGCCGC
TCACTGAAAG GCTGCGAGGC CTCTCGTAAA CGTATGATTG TAAGTAACCT GCGCCTAGTC
GTTAAGATTG CACGCCGTTA CAATAATCGT GGGTTGGCAC TTCTTGATTT AATTGAAGAA
GGTAATTTAG GGCTTATTCG CGCTGTCGAA AAGTTCGACC CTGAACGCGG GTTCCGCTTT
TCCACATACG CCACGTGGTG GATTCGACAA ACCATCGAAC GCGCCATCAT GAATCAAACG
CGTACTATCC GTTTGCCCAT TCATGTGGTT AAAGAACTCA ATGTTTATTT ACGCGCTTCA
CGTGAACTTT CTCAAAAGTT AGATCATGAG CCTACTGCAG AAGAAATTGC AGCGGCACTA
GACAAGCCTG TAGAAGATGT CACAAAGATG CTTCGACTAA ACGAACGCAT TACCTCTGTT
GATACGCCTA TTGGCGGAGA AAATGACAAA GCTTTGCTCG ACATTATTGC TGATGAAAAA
GAGTTCAGCC CTGAAGAGAG CCTTCAAGAC TCAGACATCA AAAGTAATAT TATTACCTGG
CTTGAAGAAC TTAACCCTAA ACAACGCGAA GTACTCGCAC GCCGTTTTGG GCTTATGGGA
TACGAGCCAT CGACGTTGGA AGATGTTGGT GCAGAAATTG GCCTAACACG TGAGCGTGTT
CGTCAGATTC AAGTAGAAGC ACTACGCCGT CTTCGCGATA TGCTGGGCCA TCAGGGGCTT
TCATTAGAGA ATCTGTTCGA CCAAATGAAG TAG
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| Protein sequence | MGKSNKALES KSQDDLEVID MPADMKADEA LTNDAELEND DAIFSQDDQP KNLDATQLYL
GEIGFSPLLT AEEEVYFARR SLKGCEASRK RMIVSNLRLV VKIARRYNNR GLALLDLIEE
GNLGLIRAVE KFDPERGFRF STYATWWIRQ TIERAIMNQT RTIRLPIHVV KELNVYLRAS
RELSQKLDHE PTAEEIAAAL DKPVEDVTKM LRLNERITSV DTPIGGENDK ALLDIIADEK
EFSPEESLQD SDIKSNIITW LEELNPKQRE VLARRFGLMG YEPSTLEDVG AEIGLTRERV
RQIQVEALRR LRDMLGHQGL SLENLFDQMK
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