| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03726 |
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| Symbol | |
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| ID | 6778207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4025782 |
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| End bp | 4026651 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642757179 |
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| Product | hypothetical lipoprotein NlpD |
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| Protein accession | YP_002128012 |
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| Protein GI | 196158523 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGGC ATCGGTTTTA TTTAACATTA TTCTTATATG TAAGTGTACT TCTGGGAGGC
TGTGCAGGGC GAACTGCACC GGCCCCTGTT ATTTTATTAA ATAGCCAGGT TTCAGACGGC
AGCGAAGAAT ATACAAAGAA AACCTATAAA GTGCAGCGCG GTGATACCCT TTACGCTGTG
GCTTGGTATA CGGGAAACGA CTACCGCGAC TTGGCAAAAT ACAACCAATT ATCAGCGCCT
TATACTATTT TCCCCGGGCA AATATTAAAG GTTACCCCGC CCGCAAACTT AGCTACAGAC
CGCATTATAC CTAAGCCACA GACCAAAAGG TCAGCAGGTC CGACCTCACC GAATGTAGAC
AAAAGTTTGG TTGACCGCCC CACGCCACAA GCGTATCGTA AAAGTGAAAA AGTTGTTAAG
CCACAAAACG TTAGCAGTGT CAAGAAACCG TCGACAAACG TCAAAAAACG GGTGTTAAAT
AGTTTTCCAG ACAAGGTTCA AAGGTGGATA TGGCCTGCAG AAGGTAAGTT AGTCGGTACT
TTCAGTAAGT CAGAGTCAGG CAACAAAGGA ATTGATATCG CTGGTGCTAA AGGCAGTAAA
GTTGTAGCAG CAGCAGATGG AAAAGTTGTT TATTCAGGGA GCGCACTTAG AGGTTACGGT
AATCTGGTTA TTATTAAACA CACAGATACC TTCCTAAGTG CTTATGCCTA CAACGATACT
ATTTTAGTTA AAGAACGAGA GTGGGTGTCA GCGGGGCAGC AAATAGCGAC CATGGGTGAT
AGCGGCACAA ATTCGGTCAA ACTTCACTTT GAAGTTAGAT ATCGAGGGAA ATCTTTAGAC
CCGATGAAAT ACCTGCCAGT ATTAAAATAA
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| Protein sequence | MHRHRFYLTL FLYVSVLLGG CAGRTAPAPV ILLNSQVSDG SEEYTKKTYK VQRGDTLYAV
AWYTGNDYRD LAKYNQLSAP YTIFPGQILK VTPPANLATD RIIPKPQTKR SAGPTSPNVD
KSLVDRPTPQ AYRKSEKVVK PQNVSSVKKP STNVKKRVLN SFPDKVQRWI WPAEGKLVGT
FSKSESGNKG IDIAGAKGSK VVAAADGKVV YSGSALRGYG NLVIIKHTDT FLSAYAYNDT
ILVKEREWVS AGQQIATMGD SGTNSVKLHF EVRYRGKSLD PMKYLPVLK
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