| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03723 |
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| Symbol | |
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| ID | 6778188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4023406 |
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| End bp | 4024491 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642757176 |
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| Product | Pseudouridylate synthase |
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| Protein accession | YP_002128009 |
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| Protein GI | 196158520 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.143609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGT TAAATACCGA CCATTGGCAG TACTATTACG CAAAGCCCGT ATCGACCGGC
ATCTTTAAAT TCCAAGCCGA CGACTTTCAA GTAGTCGAAG ACTTAGGTTA TTCACCATGT
GGTGAGGGAG AGCACCAGTT TGTATTTGTT GAAAAAACGA ATACAAATAC CGCGTTTGTC
GCAGAGCAGC TTGCGCGCTT TGTTAACCTC CCCCTTCGAC AAATTACCTA TGCAGGGCGT
AAGGATAAAT ACGCCGTAAC CCAACAGTGG TTCGGCATTC ACGCCCCGGG AAAGCCAGAT
TTTGACTTTA GCAACTTTGA ACTTGAAGGT GTTAAAGTAC TCAAGCAAGT TCGCCATAAC
AAAAAGCTAC GAACAGGCCA GCTCAAAGGT AACCACTTCA CAATTACGCT TAGGCAAGTA
CTTCACCCTG AAGCCATTGA AGCGCGTCTT CAGGAAATTG AAAAGCATGG AGTTCCAAAT
TATTACGGCG AACAACGCTT TGGCGTTATG CGATTAAACG ACATGGGCGA AGTGCAGCGC
GGCGGTAATT TAGTTATGGC TGAGCGTATG GTGAACGGTG AGTCCATTAG GCACAGAAAC
AAGCGCTCTA TGGCGTTATC GGCTTTGCGC AGCTGGCTGT TCAATGAAAT GCTCTCCACT
CGCCTTGAGC AAAACAAGTT CGATACGATT ATTGAAGGTG ACGCGCTAGT ACTGACTGGA
TCAAACAGTT TTTTCATTAA TGGCGGCGCC ACCAACACAG ACGAACAGCA AGACGCCCAG
CGTCGATTTG ACGCTAAAGA CGTATGCCCA TCAGCACCGC TTTGGGGTAA AGGTGAACTT
GTGACCCAAG CCAACGCACT AGCGCTAGAA CAAGCGGTAG CAGAACAAAA CAGTGAAGTG
ATCGACTTTT TAAGCCAGTG CGGTTTCGAT CAAGAGCGCC GAGCGATAAA AATTTGGCCA
TCACAGCTTG AATGGCAGAG TAAGGGTGAT ACATTTACTA TCTCATTTGC ACTTCCTAGT
GGCTGCTTTG CTACTTCGGT CCTTAGGGAG TGTGTAGAGA CCTTGTCTCC CATTAACAGG
GTTTAA
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| Protein sequence | MKPLNTDHWQ YYYAKPVSTG IFKFQADDFQ VVEDLGYSPC GEGEHQFVFV EKTNTNTAFV
AEQLARFVNL PLRQITYAGR KDKYAVTQQW FGIHAPGKPD FDFSNFELEG VKVLKQVRHN
KKLRTGQLKG NHFTITLRQV LHPEAIEARL QEIEKHGVPN YYGEQRFGVM RLNDMGEVQR
GGNLVMAERM VNGESIRHRN KRSMALSALR SWLFNEMLST RLEQNKFDTI IEGDALVLTG
SNSFFINGGA TNTDEQQDAQ RRFDAKDVCP SAPLWGKGEL VTQANALALE QAVAEQNSEV
IDFLSQCGFD QERRAIKIWP SQLEWQSKGD TFTISFALPS GCFATSVLRE CVETLSPINR
V
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