| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03721 |
|---|
| Symbol | |
|---|
| ID | 6778145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 4022196 |
|---|
| End bp | 4022921 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642757174 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_002128007 |
|---|
| Protein GI | 196158518 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0171709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TGACATCACC CCGCGTGGTT GCAGTTATCC CCGCAGCCGG AGTTGGTAGC
CGTATGCAGG CCGACCGCCC GAAGCAATAC CTCTCTCTAA ATGGTAAAAC CATTCTTGAA
CACACGATTG ATGCGCTACT CAATCACCCA CTTATTGATG ATGTGATTGT TGCGATAAGC
CAAGGTGACG AGTACTTTGA CCAGTTAGGG CTTAGGCAGA AGCCTATTCG TGTGGTTGAT
GGTGGCAAGG AACGTGCAGA TAGCGTATTG AACGGCATCT TATCGTTGGA CGAGAATGAC
TGGGCACTGG TTCACGACGC CGCGCGTCCG TGTGTAGATG ATGCCGACAT TTCCAACCTG
CTGTCACTTA TAGGCAGCGA AGACGTTACG GGTGGCATAC TAGCGACGCC GGTGAGAGAT
ACGATGAAGC GGGTAAAGCC TTCGTCAAAT ATAATCTCTC ATACCGAAGA CAGGAATGGG
CTATGGCATG CCCTTACGCC CCAACTATTT CCAGCCATGT TGCTCAAACG GGCGCTTCAA
GAGGGGTTGG CCCAAGGTGT TAGCATTACT GATGAAGCGT CGGCCATGGA GTTTGCTGGT
CACAGTGTAG CCATGGTGAG CGGAAGCCCG GCGAATATAA AAATAACACA CCCGGCCGAC
CTTCCTTTGG CAGAATTTTA TCTTAAGCAA AAATTTAGCG CGCAAGGCGA TAGCGCAAAA
AATTAA
|
|---|
| Protein sequence | MKKMTSPRVV AVIPAAGVGS RMQADRPKQY LSLNGKTILE HTIDALLNHP LIDDVIVAIS
QGDEYFDQLG LRQKPIRVVD GGKERADSVL NGILSLDEND WALVHDAARP CVDDADISNL
LSLIGSEDVT GGILATPVRD TMKRVKPSSN IISHTEDRNG LWHALTPQLF PAMLLKRALQ
EGLAQGVSIT DEASAMEFAG HSVAMVSGSP ANIKITHPAD LPLAEFYLKQ KFSAQGDSAK
N
|
|---|
| |