Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03711 |
Symbol | |
ID | 6778005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4009015 |
End bp | 4009692 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642757164 |
Product | DNA mismatch repair protein |
Protein accession | YP_002127997 |
Protein GI | 196158508 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3066] DNA mismatch repair protein |
TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.60827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCAC CAGCCTCTCC CCCCTCTTCG CCAGATAGTC TTTTAAAGCG TTGTCACGCG ATTGCCGGGC TGACGCTTGG AGAATTAGCT GAAATGGCCC ATGTTGCTAT ACCGGCAAAC CTGCAGCGCC ACAAAGGGTG GCCAGGCATG CTAATTGAGA AGTGGTTAGG GGCTAGCGCA GGTTCAAAGC CACAGCAGGA TTTTCCAGAG CTCGGTATCG AGCTTAAAAC TATTCCTATC GACGCTAACT TCTCACCCTT AGAAACCACC TATGTATGCT TTGCGCCCCT TTTAATGTCG CCAGGTATCA CATGGGAAAC CTCAAACGTT CGCAATAAGC TTCAGCAGGT GCTGTGGTTG CCCATTGAAG GTGACAGAGC TATCCCTCTT GCCGAGCGGC GTGTGGCGAC GGGTTTTTAT TGGCGCCCTA ATGAACACGA AGACGCCCTA CTCAGGCATG ACTGGGAGGA ACTGGTTGAG TACATTGCAA CCGGGCAAGT CGAGTCAATC ACTTCCCGGC AAGGTGAAGC TCTCCACATA CGTCCGAAAG CGGCTAACGG AAAAGTGCTG ACCGATGCAT TAGGGCCAGA AGGGCAGCGC ATTAAAACCC GGCCGCGAGG GTTCTATTTG CGTAAAACCT TTACGCAACA GATTTTAATG AATGCCTTTG GCGGATAA
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Protein sequence | MQPPASPPSS PDSLLKRCHA IAGLTLGELA EMAHVAIPAN LQRHKGWPGM LIEKWLGASA GSKPQQDFPE LGIELKTIPI DANFSPLETT YVCFAPLLMS PGITWETSNV RNKLQQVLWL PIEGDRAIPL AERRVATGFY WRPNEHEDAL LRHDWEELVE YIATGQVESI TSRQGEALHI RPKAANGKVL TDALGPEGQR IKTRPRGFYL RKTFTQQILM NAFGG
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