Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03710 |
Symbol | |
ID | 6777992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4008359 |
End bp | 4008847 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642757163 |
Product | dinucleoside polyphosphate hydrolase |
Protein accession | YP_002127996 |
Protein GI | 196158507 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.626729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCAAG TATTTTGGGC AAGACGTTAT GGTCAACATT CATGGCAGTT CCCTCAAGGC GGAATTGATG AAGGGGAATC TGCTGAACAA GCTATGTACC GGGAGCTTCA CGAAGAAGTA GGGCTGACAC CGAAAGATGT CACCATTTTA AGTGTTACCC GTAACTGGCT TAGATATAAG CTGCCAAAGC GATTAATTCG ACAAGGTAGT AACCCTGTTT GTATAGGGCA AAAACAAAAA TGGTTCTTGT TGCAGCTAGA TTGCAACGAG CGCGATGTTA ATGTGCTTAA AACAGGTCAT CCTGAATTTG ATGACTGGAG GTGGGTAAGT TACTGGTATC CTATTAGGAA CGTTGTATCG TTTAAGCGGG ATGTTTACAG GCGGGTAATG AAGGAATTTT CACCTGTTGT TATGTCTGCC CAGCAGCGCC CTTTGCAGCG TCAAAACGCA GCGCCACATA AGCGTGGAAA AAAGCGCAGG CGTGGCTAA
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Protein sequence | MGQVFWARRY GQHSWQFPQG GIDEGESAEQ AMYRELHEEV GLTPKDVTIL SVTRNWLRYK LPKRLIRQGS NPVCIGQKQK WFLLQLDCNE RDVNVLKTGH PEFDDWRWVS YWYPIRNVVS FKRDVYRRVM KEFSPVVMSA QQRPLQRQNA APHKRGKKRR RG
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