| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03704 |
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| Symbol | |
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| ID | 6777965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4001270 |
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| End bp | 4002247 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757157 |
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| Product | GGDEF domain protein |
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| Protein accession | YP_002127990 |
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| Protein GI | 196158501 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAT CCATTGATAC TTTGAATCGC AGTGCGGTAT CTCAAGTTCC CTTGGAATTA
TTAGATTCTA TTGAGGTTGG TATTGCCGTG CTCGATAGAA ACTTCACCGT ACAAGTATGG
AACAAATTTT TAGAAAACCA CAGTGCTAAA AAAGTCGATT TTATAATCGG GCATAGCCTG
TTTGACCACT TTCCTGAAAT AGAAGAAAAG TGGCTTAGAA CCAAGGTCGA CCCGGTTTTT
AATTTGAAAA GCCCCGTGTT TATTATTTGG GAGCAGCGCC CTTACCTATT CAAATTTGCC
TGTAATCGCC CCGTTACCTG TGCTGCTGAG TATATGTATC AGAACGTGAC CATGTTTCCC
ATCGTTGATA AAGATGGCAA TGTGGAGCGT TTTTGTATGC TTGTATACGA TGTGACAGAG
CAAGCGCTAG GTAAGCTAGG TATGGAGCAC CTCAATCAAG AGCTTAAAAC AGCGAGCCGT
GTAGATGGCC TAACCGGGCT ATTCAACCGT CGCTACTGGC AAGAACGTTT TGACGAAATG
TATAAGCTTT GCGTTAGAAG AGACAAGCCT AGCACGGCAG TTATGCTAGA TATTGACCAC
TTTAAACGCA TTAATGACAC CTACGGTCAT CAGGCGGGCG ACAAGGTCAT AAAAATGCTA
GCGGCTTTGA TAAAACGCTG TGTGCGCGAA ACCGATTTAG CCGGGCGCTA TGGTGGAGAA
GAGTTCGCGA TTATCCTCAA TGACTCTACC GTTGAAGATG CGCGTATTGT CGCTGAGCGA
ATTCGTCAGC TCGCACAGCG TTTGGTGGTC GAGCACGAAG GCGAGTCGAT AAATTTTACC
GTCAGCCTTG GTCTTGCCCA ATTTTGTTCA GCGTTTAAAG GCCCTCTGGC ATGGTTAGAA
TGTGCAGATA AAGCGCTTTA TGACGCAAAA GAAAGCGGTC GAAATCAATA TCGCGTTTAT
GATACAAGCC AACGCTAG
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| Protein sequence | MNASIDTLNR SAVSQVPLEL LDSIEVGIAV LDRNFTVQVW NKFLENHSAK KVDFIIGHSL
FDHFPEIEEK WLRTKVDPVF NLKSPVFIIW EQRPYLFKFA CNRPVTCAAE YMYQNVTMFP
IVDKDGNVER FCMLVYDVTE QALGKLGMEH LNQELKTASR VDGLTGLFNR RYWQERFDEM
YKLCVRRDKP STAVMLDIDH FKRINDTYGH QAGDKVIKML AALIKRCVRE TDLAGRYGGE
EFAIILNDST VEDARIVAER IRQLAQRLVV EHEGESINFT VSLGLAQFCS AFKGPLAWLE
CADKALYDAK ESGRNQYRVY DTSQR
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