Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03703 |
Symbol | |
ID | 6777888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3999895 |
End bp | 4001241 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642757156 |
Product | putative muropeptide transport protein |
Protein accession | YP_002127989 |
Protein GI | 196158500 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCAAT ATGCTTTTGA GTTATTGCCA AAGGCTGAAG TTTTGCTTAC CGCTTTAAAA ACGTTCAACG ACAAACGCTA TTTAAGTATT TTTCTGTTTG GTATTTCCAG CGGTTTCCCT TGGATAATGA TTGGCTCAGT GCTATCAGCG TGGCTAAAAG ACGAAGGCTT GTCCCGCTCT GCAATCGGCC TTTTCGGAAT TATCTTTGCC ACTTACTCAT TCAACTTTTT ATGGTCGCCC CTTGTAGATA AGCTCAAGCC ACCACTATTA GGTCAGCGTA AAGGGTGGAT TTTCGCTATG CAAGGCTGCA TCGTTTTACT CTGTCTTGGT ATGTCGCAGC TAAGTGCAAC TTACGACTTG TATTACGTAG CGTTAATTGG TCTGCTCATT GCTGTAGCGT CAGCTACACA GGACATCGCC ATTGATGGCT TTCGCATCGA TTGTGTGGAA AAAGAGGATA AAGACGGTAT GTCAGCAGCG TCCTCTGTGG CGACGGCTGG CTGGTGGACA GGGTATGGTG GGCTTGGTGC CATACCGTTT TTCTTGGCCG ACTTAACGAC GTGGTCATGG CCCAACATTT ATCTTTTGCT AAGCGTAATA ATGGTACTTT TAATGTGCGC TACGTGCATA GCAGATGAAC CTCAGATTGA TAGAGAGGCT TTGCTTGAAA AGATAACAGA CGCCAACGCT ACGAGCTCGC CACTTGTCTA TTGGATTAGA ACCACGCTTA TCACGCCTTT TGCCGAGTTT TTTAACCGCA ATGGTGTGAA ACTAGCAGCG TCGTTTCTGC TTTTCATCTT TCTATTTAAA ATTGGCGAAG CATTTTTAGG GCGCATGAGT ATCGTTTTTT ATAAAGAGGT AGGGTTCTCC AACAGTGACA TTGCCACCTA TTCGAAATTA CTCAACTGGT GGGTGACCAT TGTTTTTTCT TTGTTAGGAG GCTTAGTTAA TATTCGCTAC GGCATATATC GAGGGCTGAT GATTGCGGGC GTCGCCATGG CGGCGTCGAA TCTTCTTTTT GCGCTGATTG CGCAAACGGG CCCATCCACC TCGTTACTCG CCGTCACGGT GATCGTTGAT GGGTTTACCG GCGCATGGAG TACGGTAGCG ATGGTCGCTT TTATCTCGCT GCTGTGCAAC AGAGCCTTTA GCGCCACTCA GTATGCGCTG ATGGCGTCAT TAAGTGTAGC CGGCAGGACA TTGGTTGCCT CTAGCAGCGG TATTGTTGTT GATAGCTTAA ACGGCAACTG GAGTTTATTT TTCATCATTA CTGCCGTAAT GGTTATTCCA AGCCTTTGCT TTTTGTATTC AATTCGTCAC CATATAAAGC GCGTGGAAAC GGCTTAA
|
Protein sequence | MAQYAFELLP KAEVLLTALK TFNDKRYLSI FLFGISSGFP WIMIGSVLSA WLKDEGLSRS AIGLFGIIFA TYSFNFLWSP LVDKLKPPLL GQRKGWIFAM QGCIVLLCLG MSQLSATYDL YYVALIGLLI AVASATQDIA IDGFRIDCVE KEDKDGMSAA SSVATAGWWT GYGGLGAIPF FLADLTTWSW PNIYLLLSVI MVLLMCATCI ADEPQIDREA LLEKITDANA TSSPLVYWIR TTLITPFAEF FNRNGVKLAA SFLLFIFLFK IGEAFLGRMS IVFYKEVGFS NSDIATYSKL LNWWVTIVFS LLGGLVNIRY GIYRGLMIAG VAMAASNLLF ALIAQTGPST SLLAVTVIVD GFTGAWSTVA MVAFISLLCN RAFSATQYAL MASLSVAGRT LVASSSGIVV DSLNGNWSLF FIITAVMVIP SLCFLYSIRH HIKRVETA
|
| |