| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03699 |
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| Symbol | |
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| ID | 6777902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3994681 |
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| End bp | 3997524 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642757152 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_002127985 |
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| Protein GI | 196158496 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAG ATAGTCAATT TTCAGTTGGT CAACGTTGGT TAAGCAACAC GGAAACAGAG
CTAGGTTTAG GTGTGATTAT GGGCACCGAT TTCCGTTCAG TTGAAGTATT GTACCCCGCA
ACTGGCGAAG CACGTAAATA TACCAAACAA GACGCTCCAC TAACGCGACT CATCTTTGAA
ATTGGCGAAA CAGTAAAAAG CCAAGATGGT TGGGAAATGA CCATTACAGA AAAAGAAGAA
AGCCAAGGGG TGTGTATTTA TCACGGGCTT CGCGAAGACA CCAAAGCGCA AGTGCGTTTG
CCCGAGACGA TGCTAGACAG CCATATTCAA CTAAACCAAC CTGAAAGACG TTTGTTCAGC
CAGCAGCTCG ACAACCCAAA GTGGTTCGAT TTACGAGAGC GTGCTTTAGA CTATCAATAC
GACTACCTTC GCTCTAGCAC TATCGGCCTA GCTGGCGCGC GTATTTCTCT TATTCCTCAT
CAGCTTCACA TTGCTTCAGA AGTCGGCGGT AGACACGCGC CGCGCGTACT CCTTGCCGAT
GAAGTAGGGT TAGGTAAAAC CATTGAAGCT GCGCTAATTA TCCATCAGCA GCTTAAAACG
GGCCGCGCTG AACGCGTGCT TATTTTGGTC CCTGACTCAT TAGTACACCA ATGGCTGGTT
GAGATGCTTC GTAGAGTAAA CCTACCCTTT GCCATTTACG ATGAAAGTCG TTGCGACGCG
ATAGAAGAAA GCGAAGCGTC TGATGCTGGC GAAGTGAATC CGTTTGAAAA CGATCAGCTA
GTACTTTGTA GCATCGACTT TTTAAGCCAA AGTGAAAAGC GCCAAAAGCA AGTTCAAGCC
GCAAGCTGGG ATTTGATGGT TGTGGATGAA GCTCATCACT TGGCGTGGTC AAGCGAGGCG
CAATCAGCTG AGTATAAGTG CGTTGAAGCT TTAGCTAACC TAACGCCTGG TGTATTGCTG
CTTACGGCAA CCCCAGATCA GCTTGGTCAC GAAAGTCACT TTGCTCGCCT GCGTCTTCTT
GACCCTGCTC GTTTTCATAG TTACAACGCT TTTTTAGAAG AAGAGTCGAA ATATAGCCAG
CTGGCCGACG CCGTCGCGCC ACTGCTTTCA GATGCAGAGC CTAACGACAA ACAACGTACC
AAATTGGCAG AGTTCGCCCC TGATGTCATG GAGCACACCG GCGATTTGAG CACGCCAGAA
AACCGCCATG CGCTGTTACA CCAGTTAATT GACTGTCACG GCACTGGCCG CATGCTGTTT
AGAAACCGTC GCGCTAATAT TGAAGGCTTT CCTGAACGTA AACTGAGCGC TTATGAACTT
GCGTTGCCTG AAGTCTACGC AGATGCGGTA AGCGGCGGCG ACCTGACCTA CTCGCTTTAC
CCCGAGCGAA TGGCCAACGT GGTAAATAGC TGGACTAAAC ACGACCCTCG TGTTGAATGG
CTGCTTGACT TCATGCAGAG CGTTAAGCCT GAAAAAATAC TGCTTATTTG TGCCAGTGCT
CGCACTGCGC AAGAGCTAGG TGAAGTCATT CGCACTCAAT CAGGCATTCG ACACAGCGTA
TTCCACGAAG GTATGAGCAT TGTAGAGCGC GACAAGGCTG CTCACTACTT TGCCGACGAG
GAAGAAGGTG CACAAATTCT ACTGTGTAGC GAAATTGGCA GTGAAGGCCG TAACTTCCAG
TTTGCCCACC ATTTGGTGTT GTTCGATTTA CCCATTACAC CTGATTTACT GGAACAGCGC
ATTGGTCGAC TCGATCGAAT TGGCCAAACG CAAACAGTAC AAATTCACGT ACCGTATCTT
GCTAAGACCG CGCAGCATGT GTTGTTAGAT TGGTACCATG AAGGACTAAA CGCATTTGAG
AAAACCTGCC CGACAGGCTC TGGCGTATTC GATGACGTTA AACCGTTGCT TGTTGGTGCA
TGCTTACATC CCGATGATAT AAGCGCTCGT GATGAACTTA TCAATATGAG CGTAACGCTG
AACAGCCAGC TTGTAGCGCA GTTGGAGGCC GGACGAGATC GCTTACTAGA GTTAAATGCC
TCTGGTGAAG GGCGCGTAGA GCAGTTACTC GAAGACATTG TTACCCTTGA TAGCGAACAA
GATCTATCGC GCTTCATGGG CCGCGTGTTC GACGCTATCG GTGTACAGCA AGAAGAGAAA
GGCAACGACT GCTTTATTCT TATGCCTACC GAGTCTATGG TGAGTCAGCT TCCTGGCCTT
GACCCTGAGG GAATGACAGT CACCTACAAG CGCCGTGTGG CAACAACCTT AGAGAACGTG
CAGTTTCTTA GCTGGGACCA CCCTCTTGTT CATACCGCCA TTGACGTTAT CCTTACGGAT
GTTCACGGCA AGAGTAGCAT GGGCTTTATT GCTGAGCCGT CGCTGCCAAA AGGCGCATAC
TGGATAGAGG CGTTATTTGT TCTTCATGCT CAAGCGCCAA AAGCGTTGCA GCTTGGCCGT
TTCTTACCGC AGACGCCGGT ACGCGTATGC TTAGATGCAC AAGGAAATGC GTCTGACTTA
AGCTTCGATG TGAAACGTAA GATTGGACGT AAAATTTCAG CGCAGCTATT GAAAGCCCTG
CAACAGCCAC TTGAGTTGGC TATTGAGAAG GCGCGTAAGC TTGCCCACCA GCAGGCCAAT
CAAAAGCAGC ACGACGCGTT GAATACCATG CACTTGACCT TGGGCGAAGA AATTCAACGT
TTACGCGACT TACAAAAGCG CAATCCAGCG GTGCGAGACA GTGAAATTGA GTTCATTGAA
ACGCAAATGA ATGCCCTCGA TAAGGTAATT CAGGAAGCTG ATGTTCAGCT AGATGCGTTG
CGAATTGTGG TAAACAATCC GTAA
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| Protein sequence | MSSDSQFSVG QRWLSNTETE LGLGVIMGTD FRSVEVLYPA TGEARKYTKQ DAPLTRLIFE
IGETVKSQDG WEMTITEKEE SQGVCIYHGL REDTKAQVRL PETMLDSHIQ LNQPERRLFS
QQLDNPKWFD LRERALDYQY DYLRSSTIGL AGARISLIPH QLHIASEVGG RHAPRVLLAD
EVGLGKTIEA ALIIHQQLKT GRAERVLILV PDSLVHQWLV EMLRRVNLPF AIYDESRCDA
IEESEASDAG EVNPFENDQL VLCSIDFLSQ SEKRQKQVQA ASWDLMVVDE AHHLAWSSEA
QSAEYKCVEA LANLTPGVLL LTATPDQLGH ESHFARLRLL DPARFHSYNA FLEEESKYSQ
LADAVAPLLS DAEPNDKQRT KLAEFAPDVM EHTGDLSTPE NRHALLHQLI DCHGTGRMLF
RNRRANIEGF PERKLSAYEL ALPEVYADAV SGGDLTYSLY PERMANVVNS WTKHDPRVEW
LLDFMQSVKP EKILLICASA RTAQELGEVI RTQSGIRHSV FHEGMSIVER DKAAHYFADE
EEGAQILLCS EIGSEGRNFQ FAHHLVLFDL PITPDLLEQR IGRLDRIGQT QTVQIHVPYL
AKTAQHVLLD WYHEGLNAFE KTCPTGSGVF DDVKPLLVGA CLHPDDISAR DELINMSVTL
NSQLVAQLEA GRDRLLELNA SGEGRVEQLL EDIVTLDSEQ DLSRFMGRVF DAIGVQQEEK
GNDCFILMPT ESMVSQLPGL DPEGMTVTYK RRVATTLENV QFLSWDHPLV HTAIDVILTD
VHGKSSMGFI AEPSLPKGAY WIEALFVLHA QAPKALQLGR FLPQTPVRVC LDAQGNASDL
SFDVKRKIGR KISAQLLKAL QQPLELAIEK ARKLAHQQAN QKQHDALNTM HLTLGEEIQR
LRDLQKRNPA VRDSEIEFIE TQMNALDKVI QEADVQLDAL RIVVNNP
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