| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03670 |
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| Symbol | |
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| ID | 6777373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3958563 |
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| End bp | 3959795 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642757123 |
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| Product | putative ribosomal RNA small subunit methyltransferase D |
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| Protein accession | YP_002127956 |
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| Protein GI | 196158467 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAG AATTTATATT TGCCGACCGT CAACTCTCGC TTATTCGCTA CCCTGAAAAG
CACCAGCATG TGAGCCTTCA AGCATGGGAC AGTGCTGATG AACTGGTGAT AGAGCATCTA
GAGTCTCTTT TGAGTGAGAA TGAGCTGTCT ATCGGCGATA ATGAAAGTAC GCCGTCGCTA
ATGATCTTTA ACGACGATTT CGGCGCATTA GGCTGTTGGT TTTCACATTT AGCCCCTTAT
TGGGTTTCCG ATTCCTATAT ATCTTTGCGT TCGTTGCACG AGAATTTAAA AGCAAATTCC
TTGATACGCG CTTCTGAAGG CTCGTGTACA CAAGAACTAA AAACGTCACC GGTTAAAACA
TTAACCAGCG TTGAGAGCGC TAGTTTTAAG CCTGCATGTG CACCGGCCGT GGTAGTCATA
AAAGTGCCTC GAGCGCTTGC TTTACTTGAA CAACAGCTTA TTGATTTACA AGCCTATATT
ACGCCTGAAA CCCAGGTTAT CGCGACGGGC AAGGTCAAGG CGATCACGAA ATCGGCACTT
AACCTTTTCG AAAAATACAT TGGCCCGACG ACGACATCTC TGGCGAAGAA AAAGTCACGA
CTTATTTTTG CCACACCAAG AGACTCGTTA AAACAGGCGA CATCGCCCTA CCCAACGCGG
TGGCAGTGTA AAAGCACCAT GGGCGCTGCG CTTATTATAG ACAACCTTGC CAATACGTTT
GCACGCCAGT CGCTAGATAT CGGTGCACGC ATTATGCTGG AGCACATGAC GGTCAGTGCC
AACGACGTAG TGGTAGACTT AGGGTGCGGC AACGGCGTAC TGGGTGTTAA CGCACTCTCT
CTTGCCCCAG ATGCCAAGGT GATTTTTGTA GATGAGTCAT ATATGGCGTT AGAAAGTGCC
AGACTTAATG TACTTAACAA CTTCCCCGAT AAAATCGAAC AGTGTGAGTT TGTCGCAAGT
AATTGCTTAG AGACACTCTT AAACCGAGAA AATAAACCTG CTGTTACTAA AATTTTGTGT
AACCCACCGT TTCATCAGCA AAACGCGATT ACCGATCATA TCGCGTGGCA GATGTTTACC
GACTCTCGCG ACCTGCTTGT CAAAAGCGGG CATTTGGTTG TGGTTGGGAA TAGACACCTT
GAGTATCACA TTAAGCTTAA AAAACTGTTT GGTGGCGCAA AGGTACTTGC GAGTGACAAA
AAGTTCGTTA TCTTAGGCAC TGCTAAACGA TAA
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| Protein sequence | MNTEFIFADR QLSLIRYPEK HQHVSLQAWD SADELVIEHL ESLLSENELS IGDNESTPSL
MIFNDDFGAL GCWFSHLAPY WVSDSYISLR SLHENLKANS LIRASEGSCT QELKTSPVKT
LTSVESASFK PACAPAVVVI KVPRALALLE QQLIDLQAYI TPETQVIATG KVKAITKSAL
NLFEKYIGPT TTSLAKKKSR LIFATPRDSL KQATSPYPTR WQCKSTMGAA LIIDNLANTF
ARQSLDIGAR IMLEHMTVSA NDVVVDLGCG NGVLGVNALS LAPDAKVIFV DESYMALESA
RLNVLNNFPD KIEQCEFVAS NCLETLLNRE NKPAVTKILC NPPFHQQNAI TDHIAWQMFT
DSRDLLVKSG HLVVVGNRHL EYHIKLKKLF GGAKVLASDK KFVILGTAKR
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