Gene MADE_03669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03669 
Symbol 
ID6777276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3957588 
End bp3958229 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID642757122 
Productalkylated DNA repair protein 
Protein accessionYP_002127955 
Protein GI196158466 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTT CTCTCTTTGA GACACCTGAT GAAGAAAGTG TGCCTTACCA GCTTCCGCTG 
ACTGAGGCAG ATGTTCGGTA TTTTCCTAAC GCATTGTCGA AGAATGATGC TGACGCTTTC 
TTCGAACGGC TAAAAACCGA ATTACCCTGG AGACAAGATA CTCTTCGGTT GTTTGGTAAA 
CAGGTGAAAA TTCCCCGTCT TCAAAGCTGG CATGGCGACC CTGAGTGCAC CTATACCTAT 
TCAAACCTTA CTATGCCACC TAACCCATGG ACATCAAGCC TCGCGTTAAT TAAAGCCCGT 
TGTGAAGCGT TATGCTCGCC CAACTACGGT ACAAAATTTA ACAGTGTACT CGCTAACTGG 
TATCGCGACG GGCAAGATAG CATGAGTTTT CACTCTGATA ATGAACCAGA GTTAGGTACG 
AACCCAGTGA TTGCTTCGGT AACGCTAGGT GAGGCTAGGC CTTTTGTTTT AAAACACAAA 
GAAACAAAAG AAAAATATAC CCAAATACTC GAACACGGTA GTGTGTTGAT TATGGCTGGG 
GCAACGCAAA GTCATTATGT GCACGGGATT GCGAAGACGG CTAAGCCTAT CGGTGGTAGA 
ATTAATCTTA CTTTTCGACA CCTTATTCAA AGAGCAAGGT AA
 
Protein sequence
MQFSLFETPD EESVPYQLPL TEADVRYFPN ALSKNDADAF FERLKTELPW RQDTLRLFGK 
QVKIPRLQSW HGDPECTYTY SNLTMPPNPW TSSLALIKAR CEALCSPNYG TKFNSVLANW 
YRDGQDSMSF HSDNEPELGT NPVIASVTLG EARPFVLKHK ETKEKYTQIL EHGSVLIMAG 
ATQSHYVHGI AKTAKPIGGR INLTFRHLIQ RAR