Gene MADE_03659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03659 
Symbol 
ID6777304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3948621 
End bp3948992 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content45% 
IMG OID642757112 
Productputative nitrate reductase (electron transfer subunit) AND putative nitrite reductase (small subunit) 
Protein accessionYP_002127945 
Protein GI196158456 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAG CGCCAAATCT TTTAGCTTCA GGACAAGATA TTCAGCAATG GCACCTAGTG 
TGCGAAACAC GGGACTTAGT AAAAAATAGC GGCGTTTGCG CCCTGGTAGA GTCTCGGCAA 
ATCGCGATTT TTTGTTTATG TGTCAAAGGG GAAACCCAGG TTTTTGCGAT AAGTAATTAC 
GACCCCATTG GCAAGGCCAA CGTGCTATAT CGCGGGCTTT TGGGGTCAAT TGGCGGCGCC 
CCGGTAGTTG CGTCTCCTTT ATACAAGGAG CATTACTTTT TAGAAAGCGG GCTATGTAAG 
GAACACGATG ATATATCGGT TACCACTTAC CCAGTAAAAG TAGAAGGTGA AAAGGTTTTC 
ATTGGCATTT AA
 
Protein sequence
MSAAPNLLAS GQDIQQWHLV CETRDLVKNS GVCALVESRQ IAIFCLCVKG ETQVFAISNY 
DPIGKANVLY RGLLGSIGGA PVVASPLYKE HYFLESGLCK EHDDISVTTY PVKVEGEKVF 
IGI