Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03655 |
Symbol | |
ID | 6777176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3942276 |
End bp | 3943592 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642757108 |
Product | putative chemotaxis transducer |
Protein accession | YP_002127941 |
Protein GI | 196158452 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTCA AAAATAAAGA GTTGATAGCC GAGAAGCAAC GTTTGGAAAA GGAAATCGAG GCATATCATA CCGTTCAGGA AGAATTACGG GAAGAAATGT TGTATGTCGA ATTAAGTGCA GAAGGCCGAA TTCGCGCAGT GAATGACCTC TATTCCCAAG CTACTGGCTA TTCACTCAGC GAATTAGAAG GCAAGAGTCT AGACAGCCTA ATGAGTCAAA ATGCGTTAAG AAAGCCAGCT GCACAGGATT TACTTGGCGC CATCAAAACT CACCGCCACT GGCATGGCGC GATAAGCTTT TTCGATGCTA AAGGCCAAGA GGTTTGGGTG AGGGGGATTA TTCAGCCTAT TGATGATGCC TTTGGAAATG TGAAGTACAT CGCCTTTTAT ATGGCAGAGC AAACGCGAAA TATCACTCAC AGCAATGAAT TGAGAGACAT GATTGCTGCG CTTCATCGTT CTTCTGCTGT TATCGAATTT AAATTAGACG GCACTATCAT CACGGCGAAC GAGAACTTTT TAAAAGGGAC CGGCTATACC TTAGAACAAG TTCAAGGTAA GCATCACCGC ATCTTCTGTA CCGAAGAAGA AGCAAATTCT GAGGAATATA AACAGTTTTG GCGGGGTTTA GCAAAAGGAC AGTTAGAATC GGGGCGTTAC AAGCGTATAG ATAGTGCTGG CAATGAAGTG TGGTTAGAAG CGTCATACAA CCCAATTAGA AATGAAGACG GAGAACTGTA TAAAGTGGTG AAATTTGCCA CTGTGATTAC AGAGCAAATG CAGCGCGAAT TTGCTATTTC TGAAGCCGCG AATGTCGCTT TTAATATTTC ACAGGAAACA GGTGAACAGG CGCGCAAAGG TAATGAAGTA CTCGATTCCA CAGTGAATGC GATGAACGAA CTTACCGCTC AAATGGGTAA TGCTAGCGCA GGTATTAAGG ATCTTGACGA GCAATCACAA AAAGTCGCCG ACCTTGTAAA AAGCATTAGC GGTATTGCCG ATCAGACTAA CTTATTAGCA TTAAACGCCG CTATTGAAGC GGCACGGGCC GGCGACCAAG GTCGTGGGTT TGCCGTGGTG GCTGATGAGG TTAGGCAACT TGCCTCGCGA ACAAGCAGTG CTACAGAAGA AATTGTCAAT GTGGTAGTAG AAAATAGAAA GCTAACTGAA AATGCAGTGC AGTTGATTGA AGCTGGGCAA GAAAAAGCCC GAGAAGCGTT AGAGTATTCA ACTCAGTCTG GTCAAGCGAT GGGCGAAATA CAAAGTGGCG CGAACGAGGT GGTAAACGCC ATAGGCCAAT TCACTAAGCG TTTGTAA
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Protein sequence | MFFKNKELIA EKQRLEKEIE AYHTVQEELR EEMLYVELSA EGRIRAVNDL YSQATGYSLS ELEGKSLDSL MSQNALRKPA AQDLLGAIKT HRHWHGAISF FDAKGQEVWV RGIIQPIDDA FGNVKYIAFY MAEQTRNITH SNELRDMIAA LHRSSAVIEF KLDGTIITAN ENFLKGTGYT LEQVQGKHHR IFCTEEEANS EEYKQFWRGL AKGQLESGRY KRIDSAGNEV WLEASYNPIR NEDGELYKVV KFATVITEQM QREFAISEAA NVAFNISQET GEQARKGNEV LDSTVNAMNE LTAQMGNASA GIKDLDEQSQ KVADLVKSIS GIADQTNLLA LNAAIEAARA GDQGRGFAVV ADEVRQLASR TSSATEEIVN VVVENRKLTE NAVQLIEAGQ EKAREALEYS TQSGQAMGEI QSGANEVVNA IGQFTKRL
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