| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03595 |
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| Symbol | |
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| ID | 6779232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3881446 |
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| End bp | 3882114 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642757048 |
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| Product | phage shock protein A |
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| Protein accession | YP_002127881 |
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| Protein GI | 196158392 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0300107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATGT TTTCGCGCAT TAACGATATT GTTCAAGCAA ATATCAACGC AATGTTAGAC
AAAGCTGAAG ATCCTGAAAA AATTATTCGC TTGATCATTC AGGAAATGGA AGAAACGTTA
GTTGAAGTTC GCACCGATGC CGCCCGCTAT ATCGCACAGC AAAAAACGTT AGCGCGACAT
ATTGACGCTG CGAAAAAAGA AGTGGATGGC TGGCAACACA AAGCTCAGAT TGCGATGAAC
AACGATAAAG AGTCATTAGC TAAAGCAGCG CTAATGGAAA AGCAGAAGTA TGTAGTGAAA
CTGACATCCC TTGAAGAGCA AGAAGGTCAT TTGGCCGACA GCATTGAAAA AATCCAAGGT
GATACTGCAA GACTGAACAC AAAACTGGCA GAAGCCAAAG CGAAGCAAAA AACCTTAGTT
CAACGAAAAA ATTCAGCGCA AACACGCTTA AAAGTTAAGC AAGCGGATCA TGAAAGTAAG
ATAGATGATG CCATGACACG CTTTGAAAAT TACGAACAGC GAATCGATCA CTTAGAAGCT
CAAGTCGATG CTTATGACTT AACTAAATCA AGTGAAGCGA CCTCTCTTCA GGCTGAGTTC
GATGCAATGC AGGCAGATGA AACAATTGAA AGGGAGTTGG CTGAGCTTAA AAAGAGCAAG
GTCGCTTAA
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| Protein sequence | MGMFSRINDI VQANINAMLD KAEDPEKIIR LIIQEMEETL VEVRTDAARY IAQQKTLARH
IDAAKKEVDG WQHKAQIAMN NDKESLAKAA LMEKQKYVVK LTSLEEQEGH LADSIEKIQG
DTARLNTKLA EAKAKQKTLV QRKNSAQTRL KVKQADHESK IDDAMTRFEN YEQRIDHLEA
QVDAYDLTKS SEATSLQAEF DAMQADETIE RELAELKKSK VA
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