Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03592 |
Symbol | |
ID | 6779194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3879671 |
End bp | 3880663 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642757045 |
Product | hypothetical protein |
Protein accession | YP_002127878 |
Protein GI | 196158389 |
COG category | [S] Function unknown |
COG ID | [COG5345] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.374945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACAAT CAATTAACTC AAAACGGATA GCGATTGTCG CTGTGGTGAT TTTTCTTCTG TTCTGGCTTA TCGGGTGGTA TTGGAGCCTT TCGCCAGATA CTTTTGATAT AAGAAAGCGT TTAGAACAAA ACTCATCAGT AGAAAACCCA ACGAATATTG CGGGTTATAC ACTTACAACC ACCATGATAG ACGTGTCTGA AACCTTGCTT AATAAACCTG GTGGTTATCT TTCAAATGAC GTTATTCCCC CTAGCGTCTT TTTAGACAAT ATGCCAGCGT GGGAGTTTGG AGCATTGGAG ATGGTGCGCG ACTTAGCGCT TTCAATGCGC AAAGACTTTA GCCGCTCACA GTCTCAATCG ATTGAAAACC CTTACCTTAC TAAAGCTCAT CCCAAATTTA ATATGGACCA TAAAAGTTGG GCATTACCGT CTTCTGAATC TAGCTATGCT GAAGGTATTG AGCTTCTGAA AAAATACCGC GACGAGCTGG CAAACACGCG AAATTCAGAT AGTCAATTTT ATACGCGTGC AGACAATCTG CGCGAATGGT TGAAGCAGGT AGAAAAACGC CTAGGTAGTT ATTCACAAAG ATTAAGTGCC AGCGTAGGAT CTGCTAGAAT TAATACAGAT TTAGCTGGCG ATGCTAATGC GAAACAATCT ACGCCTAGCA TCAACCAACG CGTTGTTCAG ACAAGCTGGT GGAAGTTAGA TAATAATTTT TATGAAGCGC GTGGGGCAAC ATGGGCTCTA CTACATTTCC TTAAAGCTGT AGAAATTGAA TTTAACGATG TGCTTGAAGA TAAGAACGCA TTAGTGAGTC TTCAGCAAAT TATTCGCGAA CTGGAAGCAA CACAACAGTC TGTATTCAGT CCGATGATTT TAAATGGCAG TGGCTTTGGT ATGTTAGCGA ATCACTCTCT AGTGATGGCA AACTATATTT CTCGCGCAAA CGCTGCTTTA ATTGAAATAT CAGAACTTCT TAATCAAGGA TAA
|
Protein sequence | MRQSINSKRI AIVAVVIFLL FWLIGWYWSL SPDTFDIRKR LEQNSSVENP TNIAGYTLTT TMIDVSETLL NKPGGYLSND VIPPSVFLDN MPAWEFGALE MVRDLALSMR KDFSRSQSQS IENPYLTKAH PKFNMDHKSW ALPSSESSYA EGIELLKKYR DELANTRNSD SQFYTRADNL REWLKQVEKR LGSYSQRLSA SVGSARINTD LAGDANAKQS TPSINQRVVQ TSWWKLDNNF YEARGATWAL LHFLKAVEIE FNDVLEDKNA LVSLQQIIRE LEATQQSVFS PMILNGSGFG MLANHSLVMA NYISRANAAL IEISELLNQG
|
| |