Gene MADE_03580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03580 
Symbol 
ID6778331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3866414 
End bp3867007 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content47% 
IMG OID642757033 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_002127866 
Protein GI196158377 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.163329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAC AAGAACAGAA ATTAAAAACC CGCCAAAATA TCATCCATGC TGCTTTTTCA 
CTGCTAGACG AAAACCGTAG TTTGTCGGCA ATCAGCTTGC GTGAAGTCGC CAGAGAAGCA 
GGCATTGCAC CTACGTCTTT TTATAGGCAC TTTAAAGATA TGGATGAGCT GGGTTTAACG 
CTGGTGGATG AAGCGGGTTT AGCATTGCGT CAGCTTATGC GTCAGGCAAG ACGACGTATC 
GCGTCAGGGG GCGGTGTTAT CCATACCTCT GTTGAAACCT TTATGGAGTT CATTGCGGCC 
AATACAAACG TTTTCCGTTT ATTACTGCGT GAGCATACTG GCACGTCGTC TGCCTACCGG 
CTAGCAGTAT TCAGAGAAAT TCAACACTTC ATAGACGAAC TCACTGACTA CATCATTGAG 
CAGCAAGGTG TGGAGTATTC CTGTGCACAA CTTCAAGCTG ACGCCATGGT GAGGCTAGTA 
TTTAGTGCAG GCGCTGAGGC GTTAGAAGCT GATGAAAAGC TACGCAAGGA AATTGGCGAA 
AAAGTCAAAG CTCAACTTCG CTTTGTTCAA GTAGGTGCTA CCCAGAAAAG CTAG
 
Protein sequence
MSRQEQKLKT RQNIIHAAFS LLDENRSLSA ISLREVAREA GIAPTSFYRH FKDMDELGLT 
LVDEAGLALR QLMRQARRRI ASGGGVIHTS VETFMEFIAA NTNVFRLLLR EHTGTSSAYR 
LAVFREIQHF IDELTDYIIE QQGVEYSCAQ LQADAMVRLV FSAGAEALEA DEKLRKEIGE 
KVKAQLRFVQ VGATQKS