Gene MADE_03579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03579 
Symbol 
ID6778311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3865255 
End bp3866364 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content42% 
IMG OID642757032 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_002127865 
Protein GI196158376 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0139639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATT TTATGTCGGC CGATGAACAA CAACGTTATC AAGCGCAGTT AGACGAAAAA 
GTAGATCGTC TTTCGGCGTT ACTTTCTCCA TTTAATGCGC CTAAAACTTC GGTTTACCCA 
TCACAGCCTA CTCACTATCG TATGCGCGCA GAATTTAGGG TGTGGCACGA GGGCGACGAC 
CTCTTTCACA TCATGTTTGA TCAGGAAACA AAAGAAAAAT ATCGCGTAGA TAGTTTCCCT 
CCCGCGTGCA AAACAATTAA CGATGCGATG GAAAAGCTAC TAAACGAAAT TCGCCCTAAT 
GAAATACTAA GAAAGAAGTT GTTTCAGATA GATTACCTTT CAGCGCTATC TGGTGAACTC 
GTTATTAGCC TTTTATACCA TCGCCAGTTA GATGATGAAT GGGAAGCTGC CGCAAAGTCT 
CTTAAAAGTA CGTTGGAAAC GCACTTCCCG AAAGTGAATA TTATTGGCCG TGCAAGAAAA 
CAAAAACGCA TTATCGACAA CGATTTTGTT ATTGAGCGTT TGCCAGTAAA GGGTAATGAG 
TTCGTATTCA AGCATATCGA GAACAGCTTT ACTCAGCCTA ATGCTGAAGT AAATTGTAAG 
ATGATTGAAT GGGCTCTGGA CTGCGTTAAG CCTCTATCTG GTGATCTATT GGAAATGTAC 
TGCGGTGCCG GTAACTTCTC ATTACCGCTG GCCCTTCACT TCGATAACGT AGTGGGTACT 
GAAATAGCGA AACCCTCGGT ACAAGCAGCG CAGTTTAATA TTGAACAAAA CAGACTGCAC 
AATGTAAAAA TTGTCAGGTT AGCTGCAGAA GAATTTACGC AAGCTATGAA AGGAAAGCGT 
ACGTTTAGCC GATTAGAGGG TATCGATCTT AGCGAGTATA ACTTTACGAC TGTACTCGTC 
GATCCACCAA GAGCTGGGTT AGATGAAGAT TCATTAAGAA TGATTCAAGA TTACGACAAT 
ATTGTGTATA TCTCTTGTAA CCCTGAAACC TTAGCGCAAA ACCTTGAACT ATTGAGTGAA 
ACTCATGACG TCGCTCAATC GGCACTATTT GATCAATTTC CTTTCACCCA TCATATTGAG 
GCAGGTGTTT TACTTACACG CAAAGGCTAG
 
Protein sequence
MENFMSADEQ QRYQAQLDEK VDRLSALLSP FNAPKTSVYP SQPTHYRMRA EFRVWHEGDD 
LFHIMFDQET KEKYRVDSFP PACKTINDAM EKLLNEIRPN EILRKKLFQI DYLSALSGEL 
VISLLYHRQL DDEWEAAAKS LKSTLETHFP KVNIIGRARK QKRIIDNDFV IERLPVKGNE 
FVFKHIENSF TQPNAEVNCK MIEWALDCVK PLSGDLLEMY CGAGNFSLPL ALHFDNVVGT 
EIAKPSVQAA QFNIEQNRLH NVKIVRLAAE EFTQAMKGKR TFSRLEGIDL SEYNFTTVLV 
DPPRAGLDED SLRMIQDYDN IVYISCNPET LAQNLELLSE THDVAQSALF DQFPFTHHIE 
AGVLLTRKG