Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03573 |
Symbol | |
ID | 6778136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3853629 |
End bp | 3854615 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642757021 |
Product | putative BirA bifunctional protein |
Protein accession | YP_002127859 |
Protein GI | 196158370 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region [TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.184427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACAAG CATCAAAAGC TATAAGAAAA CATATACTCG CTTTGTTGTC TGACGGCCAT TTTCACTCAG GTGAAACCAT TGCTCAGCAG GTCGGTTTAT CAAGAACCGC GGTAGCGGGC CACATTTCCC AGCTTGCCGA TTGGGGGTTG GATGTATTTA AAGTGAAAGG TAAAGGCTAC CGATTAGAAC GAGGGTTCCC ATTGTTAAGT GCTGACAGTA TTAAACGACA TTTAGGCAAT ACAAAACGCG CGGTCATCGA TGTGGAGTCC GTATTGCCCT CTACCAATAC GGAAATGAAA AAACGTATTG CGAGTAAACG GGAAGATCTT GAAAACGGCG ATGTCGTCTT CGCCGAAATT CAAACCGATG GGCGCGGTCG CCACGGCCGT TCTTGGTTAG CCCCTGTTGG TGGTAGTCTA ACTTTCTCTA TGTACTGGTC TTTCCCTGAT GGTTACCAAA GCATGGCGGG TCTTTCTTTG CTAGTGGGGT TAGCCGTTTG CGATGCATTA AAAGAATTTG GTGTTGAAGA TGCCGAATTG AAATGGCCGA ACGATATTTA TCTACAAGGC AAAAAGCTTG CCGGTGTATT AATTGAAGTA GAAGGCCAGA TTGGCGCAAC GGCGCACAGT GTTATCGGTA TTGGTTTAAA TGTATGTGTA CCTGATAATC AGTATGATGT AGGGCAGCCT CATAGCGATC TAGCCTCTTA CCTAGGTACT ATTCCTGATA GAAACGCCTT AGCGGCAGAA ATAATTAAGT CGCTTTGGTC TTATTTACCG AAATTTACCC AGCAAGGGTT TGGTCCTTTC ACTGCGTATT GGGAAGCGTT AGACCTATAC GCCGATAAAC GTATTGTTTT GCAGATGGGC GAGAAGCGAT TTTCTGGAAT TGACAGGGGA GTGGACGCCA GCGGCGCACT ACTTGTTGAA ACACAAGACG GTATTACGCG ATTCCATGGT GGCGAAGTTA GCCTTAGAGG CAATTAA
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Protein sequence | MRQASKAIRK HILALLSDGH FHSGETIAQQ VGLSRTAVAG HISQLADWGL DVFKVKGKGY RLERGFPLLS ADSIKRHLGN TKRAVIDVES VLPSTNTEMK KRIASKREDL ENGDVVFAEI QTDGRGRHGR SWLAPVGGSL TFSMYWSFPD GYQSMAGLSL LVGLAVCDAL KEFGVEDAEL KWPNDIYLQG KKLAGVLIEV EGQIGATAHS VIGIGLNVCV PDNQYDVGQP HSDLASYLGT IPDRNALAAE IIKSLWSYLP KFTQQGFGPF TAYWEALDLY ADKRIVLQMG EKRFSGIDRG VDASGALLVE TQDGITRFHG GEVSLRGN
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