| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03564 |
|---|
| Symbol | |
|---|
| ID | 6778116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3843405 |
|---|
| End bp | 3844487 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642757012 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002127850 |
|---|
| Protein GI | 196158361 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTAC TTATTGTGTA CGTCTTCATT GCACTGGGCT TTTCTTTTTT GTGCTCCATT
GCAGAGGCTG TAATTCTGAG TGTTTCGTCA GCGTATATCT CGGTATTGGA GAAAGACGGC
AAACCAAGCG GCGCGCTATT GCGCAGTCAA ACTGATAATA TAAATACGCC GCTATCGGCT
ATATTAACGC TGAACACTAT CGCTCATACC ATGGGTGCGG CGGGGGCTGG CGCCCAGGCA
GCAGCGGTGT TCGGCGATGC ATATTTAGGC GTGATCTCAG CTGTACTGAC GCTGCTTATC
CTTATTTTCT CGGAAATTAT TCCTAAAACA CTAGGGGCAA CATACTGGCG TACGTTGGCT
CCGGTTACGG CTTATTTTCT TAAGTACCTT TCGCTTATTC TCATGCCGTT TGTGAAAATG
TCAGAGCTTA TGACTAAAGG GTTTAAGGAA GACAGCCCAT TTCGAGGCTT AAGTCGCAGC
GAGCTACATG CTATGGCTGA ATTATCAGGG CAAGAAGGCC AACTTGCTAA CCATGAAGCG
GCGTTCTTAC AAAGCTTGCT GAGCCTGCAT GAGCTTAAAA TAAAGGATGC AATCACCCAC
CGAACCGCCT TGTTCAAAGT CTGCGAGACC ATGACAGTAG AGGAGTTTTT TCATAAGCAC
GCCAATATAG AGTTTTCCCG TATTCCCGTT TTTGAAGACA AAGATTCAGA GAACATTACG
GGCTTTGTTA TGCGCTCAGA TTTACTGGTG GCACAGGCGC GGGGCAATAC CGAGAAGCCG
CTTTCTGAAT ATGCTAAAGA TATGGTCACG GTACTTAACA CTATGCCCTT GTCGGTAACG
TTCGAACACT TTATCAATAA GCACGTACAC ATGCTGCTGG TAGTGGATGA GTACGGCGGC
TTGGAAGGGG TGCTAACCCT TGAAGATTTG CTTGAGCGTT TGTTAGGCGT AGATATTATT
GACGAGAAAG ACACCACAGT AAGCATGCGC CGGCTGGCCA AGATGATGAC GAAACGCAAA
GAGCAGATGA TGATTAAAAA TGTGCCCGAT GCGTCTCTTG AGAACTCATC GAAAAAAAAC
TAA
|
|---|
| Protein sequence | MLLLIVYVFI ALGFSFLCSI AEAVILSVSS AYISVLEKDG KPSGALLRSQ TDNINTPLSA
ILTLNTIAHT MGAAGAGAQA AAVFGDAYLG VISAVLTLLI LIFSEIIPKT LGATYWRTLA
PVTAYFLKYL SLILMPFVKM SELMTKGFKE DSPFRGLSRS ELHAMAELSG QEGQLANHEA
AFLQSLLSLH ELKIKDAITH RTALFKVCET MTVEEFFHKH ANIEFSRIPV FEDKDSENIT
GFVMRSDLLV AQARGNTEKP LSEYAKDMVT VLNTMPLSVT FEHFINKHVH MLLVVDEYGG
LEGVLTLEDL LERLLGVDII DEKDTTVSMR RLAKMMTKRK EQMMIKNVPD ASLENSSKKN
|
|---|
| |