| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03563 |
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| Symbol | |
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| ID | 6778102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3842174 |
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| End bp | 3843352 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757011 |
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| Product | TonB domain protein |
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| Protein accession | YP_002127849 |
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| Protein GI | 196158360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAG TACAATGGAA AAGTAAACGC AATTCCTTCT CTCATACGCA AATATATACT
GCTAAGCAAA ACAAGCGGGT TTTCGTTTTG GCAACACTGT TTACGTCGCT TTTAGCAACC
AGCGCAGTAG CCCAAGAACT CAGCATTCCC TGTGATGAAG TTGAAGAAAA AGCACTAGCA
GAAGCCAAGA CTAACGAAGT GGAGCGGATA AGTGCATTTA AACCTGCGAC CCCGTTAGAG
CGCGTTGACC CTAGATATCC TTCTTCTGCA GCGAGAAAAG GCCGTGAAGG CTGGGTTAGG
CTGAGCTACG TTATTGATGA GGAAGGCAGA GTGAAAGACC CTGTGGTAGA AGACTTTTTC
GGAAGCCCCT CTTTTAAGCG CAGTGCGCTA TCAGCCGTTA AGAAGTGGCA GTATAATCCA
GCAATAAAGG ACGGTGAACC TACTCAGCAA TGTCACCAAG CTGTTCAAAT GGATTTCGCC
TTAGTCGGAA AAACGGGCGC CACACGTAAA TTTATTAAAG CGTATAAAAA CGTAGATGAG
ATATTTAAAG CGGGTAATGT TGAAGCGGCA GACGAAGCTT TTAAAGAGCT ATCAAGTTGG
GATACGTTAA ATCGTTACGA GAATGCTTGG TTGCTGAGCT TGGAATCACA GATTGCAGGT
GCTAAAGGCG ACATCGAAAG GGAAGCGAAA AGCTTATCGC GGTTGCTTGC TAGCAATGGA
CAAAAGCGCT TTAACAATGC CGTGTTTGAT GACGACTACG TGGCTTACGC GCTTCAAAGA
AAAATCCTTC TGGATGCTCA GCGCGGGCAC TATGCGGAGG CGTTAAAGTC GTACAGCACA
CTTCAAGAAA TGGAAGAGCA ACAAGCGCGC GTTGACGAGA TCGCTGCAAT TATAAAAAAG
ATCGAAACAT CAATTGCCTC TGAAAATAAC CTAAAGGTAC CTGTGAGCAT AGGGGACAAT
GGACGTTGGT TTCACACGCT GGTAAGAAAC AAGTTTGCTT TTAATAACAT ACAGGGCGAA
CTTGATACTG TAGAAGTGCG CTGTGACTCT CACCGAGAAA AGTTCACCGT AGCCGAGGCT
CATGTTTGGC ATATTCCACA GAGCTGGGGG CAATGCCAGG TTATGGTTAA AGGTGACAGT
GAAACAAAAT TTGATCTAGT CGAGGTTGCC AAAGGTTAA
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| Protein sequence | MKAVQWKSKR NSFSHTQIYT AKQNKRVFVL ATLFTSLLAT SAVAQELSIP CDEVEEKALA
EAKTNEVERI SAFKPATPLE RVDPRYPSSA ARKGREGWVR LSYVIDEEGR VKDPVVEDFF
GSPSFKRSAL SAVKKWQYNP AIKDGEPTQQ CHQAVQMDFA LVGKTGATRK FIKAYKNVDE
IFKAGNVEAA DEAFKELSSW DTLNRYENAW LLSLESQIAG AKGDIEREAK SLSRLLASNG
QKRFNNAVFD DDYVAYALQR KILLDAQRGH YAEALKSYST LQEMEEQQAR VDEIAAIIKK
IETSIASENN LKVPVSIGDN GRWFHTLVRN KFAFNNIQGE LDTVEVRCDS HREKFTVAEA
HVWHIPQSWG QCQVMVKGDS ETKFDLVEVA KG
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