Gene MADE_03560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03560 
Symbol 
ID6778100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3840331 
End bp3841011 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content48% 
IMG OID642757008 
Productputative hydroxylase 
Protein accessionYP_002127846 
Protein GI196158357 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTA TTGATGACCT ACTGACAAAA GACGAAGTGA CTCAGTTTCG CCAGCAGTTA 
GCGAGTGTTC CCTTTAATGA CGGGAAGAGC ACGGCAATGG GTATGGCGGC AGGTGTTAAA 
AATAATGGTC AGGCAGACGC CCAAGACAGT CGCGTTCAGC AGCTTGCTAA CGCGTTACTA 
AGTAAGCTGG GCAATAACCC TACCGTCATC TCAGGCGCGT TGCCTCAACG TATATTTCCA 
CCTTGCTTTA ACCGCTACAG CGAGTCGCAA ACCTACGGCT ATCACGTAGA CGCCGCCATT 
ATGCGTATTC CGAACACGCC AGATGTATTA AGAAGCGATA TGTCGATGAC CGTTTTCTTA 
ACGCCTAAAG AAGACTATGA AGGCGGAGAA TTAGTTATTC AAACCGGGTT CGGGGAACAA 
AAAGTTAAGT GCGATGCCGG AAGCGCCATT TTATATCCCT CATCGAGCCT CCATAAAGTC 
ACGCCCGTCA CGAAAGGCGA GCGCATCGCG GCCATTACAT GGATACAAAG CATGGTGAGC 
GACCAGCAAA TGCGTGAAAC CCTTTTCCAG CTTGATCAAA GCATTCAATC ATTGGTTAAC 
GTAGGCACCG CAGAGCGAGA GCAGCTTGAT GGACTTCATC ATGTTTACCA TAACTTGGTC 
AGAAAGTTTT CTCAGGTTTA A
 
Protein sequence
MIIIDDLLTK DEVTQFRQQL ASVPFNDGKS TAMGMAAGVK NNGQADAQDS RVQQLANALL 
SKLGNNPTVI SGALPQRIFP PCFNRYSESQ TYGYHVDAAI MRIPNTPDVL RSDMSMTVFL 
TPKEDYEGGE LVIQTGFGEQ KVKCDAGSAI LYPSSSLHKV TPVTKGERIA AITWIQSMVS 
DQQMRETLFQ LDQSIQSLVN VGTAEREQLD GLHHVYHNLV RKFSQV