| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03557 |
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| Symbol | |
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| ID | 6778050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3834720 |
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| End bp | 3835409 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642757005 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002127843 |
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| Protein GI | 196158354 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000983286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAAGA CAATCGCATT AGTAGAAGAT GACGCAGCCA TTCGAGAAAA CTACATTATG
GCGCTAAAAG CGCAGGGCTA TAGCGTTAAC GCATATGAAG ATAGGCCATC TGCTGCTGAG
GCGTTTAACC ATACGCTGCC TGATTTGGCC ATTATAGATA TTGGCTTAAA AGATGAAATA
GAAGGTGGTT TCATGCTGTG TCAGCAGCTT AGAGGGCTAT CGCAAACGCT GCCTATTATC
TTTTTTACCG CCCGAGATAA CGATGTGGAT ACTATAAGTG GCCTTAGAAT GGGTGCAGAC
GACTACCTGA CTAAAGACAT TAGTATGGCC CACTTATTGG CGCGTATCGC TGCGTTATTT
AGAAGAACAG ACTTACTTGC TGCCCCCTCT GAGCAAAAAG ATGAGCTTAA AGTAGGCGAT
TTGAAAGTGG ATGTGTCGCG AATGACCGTA AGTTGGCAGA ACCAAGCGGT TTTGCTTACT
GTTACCGAGT TTTGGATGTT GCACGCCCTT ATTAAGCGAC CGGGGCATGT AAAAAGCCGC
CAACAGTTAA TGGACGAGTC TCGCATGGTG GTAGACGACA CCACCATTAC TTCCCATATA
AAGCGTATGC GTAAAAAGTT TGTGCAGTTA GACCCTAACT TTGATCACAT CGATACGGTG
TACGGCATGG GTTATCGCTG GCAGCTTTAA
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| Protein sequence | MPKTIALVED DAAIRENYIM ALKAQGYSVN AYEDRPSAAE AFNHTLPDLA IIDIGLKDEI
EGGFMLCQQL RGLSQTLPII FFTARDNDVD TISGLRMGAD DYLTKDISMA HLLARIAALF
RRTDLLAAPS EQKDELKVGD LKVDVSRMTV SWQNQAVLLT VTEFWMLHAL IKRPGHVKSR
QQLMDESRMV VDDTTITSHI KRMRKKFVQL DPNFDHIDTV YGMGYRWQL
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