Gene MADE_03556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03556 
Symbol 
ID6778051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3833127 
End bp3834059 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content47% 
IMG OID642757004 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_002127842 
Protein GI196158353 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.333209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGT TGGATATTCA GGGGTTAACG AAAACCTATA AAGGCGGTGT GCAAGCGCTA 
AAAGGCGTAG ATCTCACCGT GCAAGAAGGG GACTTCTTCG CACTACTTGG TCCGAATGGG 
GCGGGTAAAT CTACCACTAT TGGTATCATC AGTTCATTGG TTAACCAAAC AAACGGAAGC 
GTTTCTGTGT TTGGTTACGA CCTCACAACG CAGAAAGAAC AAGCTAAAGC CTGTATAGGG 
TTAGTGCCGC AAGAGTTCAA TTTCAATCAG TTTGAAACCG TATTGCAAAT TGTGCTCAAC 
CAAGCGGGCT ATTATGGCGT TCCGCGTAGC GTAGCCAAGG AGCGCGCTAA AAAGTACTTG 
GCCCAACTAG ACTTATGGGA AAAGCGCGAT GCACGGGCTC GCGAATTATC TGGCGGTATG 
AAGCGCAGGC TAATGATAGC TCGCGCGCTT ATGCATGAAC CTAAATTGCT TATTCTCGAC 
GAGCCAACCG CGGGTGTTGA TATTGAAATT CGCCGCTCTA TGTGGGGCTT TTTAGAAGAG 
ATCAATCGTC AAGGCATCAC TATTATCCTC ACTACCCACT ACCTTGAAGA AGCAGAAATG 
CTGTGCCGTA ACATCGCTAT TATTAACAAA GGCACCATCG TAGAAAATAC CAGTATGAAA 
GCGCTGCTTT CGAAGCTGAA CGTAGAAACC TTTGTGCTGG ACATCAAAAT ACCTGAAACC 
GCCGCAAAGG CCAGTGGCTT ACTGGCCGGT TTTGAACACC GGCTTATTGA CGACCACACC 
CTTGAAGTAG ACGTAGAGAA AACCGAAGGC CTAAACCCAG TGTTCACCCA GTTAAGTGAA 
AAAGGCGTTC AGGTTATGAG CATGCGCAAC AAATCAAATC GCCTTGAAGA GTTGTTTGTA 
CGTTTAGTTG AATCGGCAAA GCAAGCCGGC TAA
 
Protein sequence
MKALDIQGLT KTYKGGVQAL KGVDLTVQEG DFFALLGPNG AGKSTTIGII SSLVNQTNGS 
VSVFGYDLTT QKEQAKACIG LVPQEFNFNQ FETVLQIVLN QAGYYGVPRS VAKERAKKYL 
AQLDLWEKRD ARARELSGGM KRRLMIARAL MHEPKLLILD EPTAGVDIEI RRSMWGFLEE 
INRQGITIIL TTHYLEEAEM LCRNIAIINK GTIVENTSMK ALLSKLNVET FVLDIKIPET 
AAKASGLLAG FEHRLIDDHT LEVDVEKTEG LNPVFTQLSE KGVQVMSMRN KSNRLEELFV 
RLVESAKQAG