| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03552 |
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| Symbol | |
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| ID | 6778040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3828609 |
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| End bp | 3830243 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642757000 |
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| Product | Glutamate decarboxylase putative |
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| Protein accession | YP_002127838 |
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| Protein GI | 196158349 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGAAG CGCAAGTTAG TTTAGAGCAC CTGTTTAGGG TCTTTACCAA ACCTGAACAC
AAAGACTCAA AGCTGGCTCA AATTGAGCAG CATTTATCTG ACAATATCTT AGATTTTCTG
TCGCAGCACG TGGTGACAAA GAAGACATCG TTAGAAGAAA TTGAAAAAGA CTTCTCAGAC
TCGAAAGTAC CTGAGTCGCC AGAGTTTGTG TCTACGCATG CTGAAAGCTT ACTTGATAAG
CTGGTTGCGC ATTCTGTAAA TACCTATTCA CCGACTTTTA TTGGTCATAT GACCTCTGCG
CTACCTTATT TTCATCTGCC GTTATCTAAG TTAATGGTGG GCCTTAATCA GAACTTGGTG
AAAATTGAAA CATCGAAAGC CTTCACGCCT TTAGAGCGTC AAGTGCTAGG TATGATGCAC
AACTTAGTGT ACGACCAACC GCAACGCTTT TACGATAATC ATTTACACAG CGCGGCGCAC
TCATTAGGCG CATTTTGCTC AGGCGGAACC ATCGCGAACA TCACTGCACT ATGGGTAGCG
CGCAACAAGC TGCTTGGCCC ACAAGACGGT TTCTGTGGTG TCGCGAAAGC GGGTCTGGCA
GCGGCATACC GACATCTCGA TATAAACAAC TTAGGCGTGA TGTGCTCTAA GCGTGGTCAC
TACTCTCTGT CTAAAGCCGT TGATGTACTA GGTTTAGGTC GTGATCAGCT ACTGACAATC
CCGGCGCCGC GACAAACCCT TGATCCGGCA AAAGCCCTTC GTATTGGTAA GCGTTATCAG
GAAGAGGGTA ACAAACTCCT TGCTATAGTG GGTGTGGGCG GTACTACCGA AACCGGGCAC
GTAGACCCTC TTGATGAGTT AGCAGACGTT GCTAACGAGT TAGGCTGCTG GTTCCATGTG
GATGCCGCGT GGGGGGGAGC AACACTGTTT TCTTCACGCT ATCGCGATAG GTTAAAAGGC
ATTGAGCGCG CTGACTCGGT AACGATAGAT GCCCACAAGC AAATGTATGT GCCAATGGGG
GCAGGCATGG CCCTATTTAA AGACCCACAA AATGCTAATG CAGTAAGGCA TCACGCACAG
TATATTTTGC GCGCTGGTTC GAAGGATTTG GGGGCCACCA CGTTAGAAGG CTCTCGTAAC
GGTATGGCGA TGATGGTCTA TTCCGCCCTG CATATTTTCG GGCGGAAGGG GTACGAGCTA
CTTATCGACC GCAGTATTGA TAAAGCGAAA GACTTCTCGC ACATGATAGA CAAAGCGGGT
GACTTTGAGT TAACCACCAC CCCGACATTA TCACTACTGA CTTATCGGGT GTGCCCTGAA
GAAGTGCAAG AGAAGCTTAA ACACGCCGAT GCCAACATGC GCAATGCGAT TAATGAGAAA
GTGGACGCCC TTGTTGTGGC TGTTCAAAAG CAGCAGCGTG AAGCGGGTAA GTCGTTTGTG
TCACGTACGC GCTTAGAAGC GCCTGATTAC CCTTCCCAAT GTATTACGGT ATTTCGTGTT
GTGTTAGCGA ACCCGTTGAC CAGCCATAAC GATTTAGCGG CTATTTTGGC TGAACAGCAT
CTTATTGCGA AAGAAACACA GGCGTGGGCA GAGTTGATGA ACTTCGTGCG CGATTCTGAA
AAGGTGGCGT CCTAG
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| Protein sequence | MGEAQVSLEH LFRVFTKPEH KDSKLAQIEQ HLSDNILDFL SQHVVTKKTS LEEIEKDFSD
SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA LPYFHLPLSK LMVGLNQNLV
KIETSKAFTP LERQVLGMMH NLVYDQPQRF YDNHLHSAAH SLGAFCSGGT IANITALWVA
RNKLLGPQDG FCGVAKAGLA AAYRHLDINN LGVMCSKRGH YSLSKAVDVL GLGRDQLLTI
PAPRQTLDPA KALRIGKRYQ EEGNKLLAIV GVGGTTETGH VDPLDELADV ANELGCWFHV
DAAWGGATLF SSRYRDRLKG IERADSVTID AHKQMYVPMG AGMALFKDPQ NANAVRHHAQ
YILRAGSKDL GATTLEGSRN GMAMMVYSAL HIFGRKGYEL LIDRSIDKAK DFSHMIDKAG
DFELTTTPTL SLLTYRVCPE EVQEKLKHAD ANMRNAINEK VDALVVAVQK QQREAGKSFV
SRTRLEAPDY PSQCITVFRV VLANPLTSHN DLAAILAEQH LIAKETQAWA ELMNFVRDSE
KVAS
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