| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03548 |
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| Symbol | |
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| ID | 6778028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3824878 |
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| End bp | 3826197 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756996 |
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| Product | poly(A) polymerase I |
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| Protein accession | YP_002127834 |
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| Protein GI | 196158345 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.339485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTG GAGAGCACGG TATATCTCGT GAAGACATAA GTGCAAATGC ATTGAAAGTA
ATGTATCGCC TTAATGGAGC AGGCTTCGAA TCGTATTTGG TTGGAGGCTG TGTGCGCGAT
ATTTTGATGG GGCACGAGCC AAAAGACTTC GACGTGGCAA CCAACGCAAC GCCAGAGCAA
ATTAAAGGCC TGTTTAAAAA CTGTCGCCTT ATTGGAAGAC GCTTTCGCTT GGCACATATC
GTGTTTGGTC GAGAAATCAT TGAAGTGGCC ACATTTCGCG GGCACCATCA AGAGTCAGAT
GAAGACGAAA ATGTACCTAA AGCGAAAGTC GTAGCGAAAC GGGACTCTCA CGGACAGCTC
GTAAGGGATA ACGTATTTGG CTCGATAGAA GAAGATGCAG AACGCCGCGA CTTTACCTTC
AATGCCATGT ACTACAGCGT GGCAGATTTT ACAGTAACAG ACTTTGCAAA CGGCTTAGCC
GCTATAGAAA AGCGTGAAGT TGAGCTTATT GGCGATCCTG AAACCCGCTA CCGCGAAGAC
CCGGTACGTA TGTTAAGGGC TGTACGCTTC GCCGTTAAGC TGGGTATGCG CATTGAAGAA
AAAACCGCAG AACCCATCAA GCCTCTGGCT AACCTACTGC AAAACATTCC TCCCGCTCGC
CTTTTCGAGG AAACGCTAAA GCTGTTTTTA TCTGGCAAAG GGGAAGTAAC CTTTTTGATG
CTGCACGAGT ACGGACTAAT TGAGCCGCTA TTCCCACAGC TGGCGCCATT TTTAAAAGAC
GAAAATAGCC GAGAAATGCA GTTTGTTCGC CGCGTGCTAG CTAATACCGA TGAGCGTATT
AATAGTAATC AGCGTGTTAC GCCGGCATTT TTATACGCCG CTTTACTGTG GTATCCGGTT
GAAGAACAGT CGCAGCATTT ACAAAGCGAA TCTGGCTTAA ATGCCCATGA TGCATTCAAT
ATTGCGTCGG GCGAGGTTAT TTCCCGTCAA ACACAGCGTA TTATGATCCC TAAGCGCTTC
TCCACCGTGG TGCGAGATAT CTGGATTTTA CAACAGCGTT TACCAAAACG TTTTGGACGC
CGCGCTTTCC AACTGCTAAC ACATCCTAAA TTTAGAGCTG GCTATGACTT TTTACTAGTA
AGAGGCCAGG TAGAAGGTGG CGACTTACTA GAGCTAGCGC AGTGGTGGAC GCACTTCCAA
CACGCTGACA ACGGCAAGCA GAAGGGCATG TTAAACGCCC TTCGCAAAAG CGAAGGTGGC
GCCAAAGGCG GCCCTCGCAA ACGCAAGCGT AAACCCGCTA AGCGAGGTCC CGATGCATAA
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| Protein sequence | MTRGEHGISR EDISANALKV MYRLNGAGFE SYLVGGCVRD ILMGHEPKDF DVATNATPEQ
IKGLFKNCRL IGRRFRLAHI VFGREIIEVA TFRGHHQESD EDENVPKAKV VAKRDSHGQL
VRDNVFGSIE EDAERRDFTF NAMYYSVADF TVTDFANGLA AIEKREVELI GDPETRYRED
PVRMLRAVRF AVKLGMRIEE KTAEPIKPLA NLLQNIPPAR LFEETLKLFL SGKGEVTFLM
LHEYGLIEPL FPQLAPFLKD ENSREMQFVR RVLANTDERI NSNQRVTPAF LYAALLWYPV
EEQSQHLQSE SGLNAHDAFN IASGEVISRQ TQRIMIPKRF STVVRDIWIL QQRLPKRFGR
RAFQLLTHPK FRAGYDFLLV RGQVEGGDLL ELAQWWTHFQ HADNGKQKGM LNALRKSEGG
AKGGPRKRKR KPAKRGPDA
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