| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03540 |
|---|
| Symbol | |
|---|
| ID | 6777953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3819447 |
|---|
| End bp | 3820049 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756988 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_002127826 |
|---|
| Protein GI | 196158337 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCT GGTCTGCTGC CATCATGCTC TTTTTGATCA TGGACCCGCT CGGTAACTTG
CCTGTATTCA TGTCGGTGCT TAAATCGATT GAGCCAAAGC GACGCCAATT TATTCTTATT
CGCGAGTTAC TGTTTGCCCT AGGTATCTTA TTTCTATTTT TATTCAGCGG GCAATCTGTG
CTTAATTTTT TGAACGTTGA GCAGGAAACC GTCAGCATAG CAGGCGGTAT TATTTTGTTT
CTTATCGCAC TTAAAATGAT ATTTCCTTCA ACCGGTAACC CCAGCGGATT GGCGGTAGGT
GAAGAGCCGT TTCTGGTACC TCTCGCTATT CCTATGATTG CTGGGCCGTC CACATTAGCG
GCGCTGATTC TGCTTGCGAA TCAGGCACCA GATAGAATGG TTGATTGGTC GATAGCGCTT
GCCGCTTCGT GGTCGATAAG CGCTGTTATC CTTTTATTTT CAAATGTATT TCATAAAATT
TTAGGGGAGC GAGGTCTAGT TGCTATGGAG CGATTAATGG GTATGATCCT TGTTATGATC
GCTATTCAAA TGCTGCTTGA TGGCGTTACT TCATATTTCA TGCATGCCAC TGGAGCACTG
TAA
|
|---|
| Protein sequence | MDTWSAAIML FLIMDPLGNL PVFMSVLKSI EPKRRQFILI RELLFALGIL FLFLFSGQSV
LNFLNVEQET VSIAGGIILF LIALKMIFPS TGNPSGLAVG EEPFLVPLAI PMIAGPSTLA
ALILLANQAP DRMVDWSIAL AASWSISAVI LLFSNVFHKI LGERGLVAME RLMGMILVMI
AIQMLLDGVT SYFMHATGAL
|
|---|
| |