Gene MADE_03530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03530 
Symbol 
ID6777842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3808947 
End bp3809384 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID642756978 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_002127816 
Protein GI196158327 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00128055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGAC TAATTCAACG CGTATCAGAA GCCAATGTTA CTGTAGCAGG TGAAGTTATC 
GGCGAAATTG GCAAAGGCAT GCTAGTCCTG CTGGGCGTTG AAAAAGAAGA CGGCGATGCC 
GAGATTGAAA AGCTTGCCAA CAAACTATGC CGTTATCGAA TGTTTAGTGA TGAAGACGGC 
AAAATGAACC TGAATATTGA GCAAGTCGGT GGGGAAATAC TGGTTGTATC TCAGTTCACC 
CTTGTTGCAG ATACGCAAAA AGGGAATCGA CCTGGGTTCT CTCGTGGCGC GACGCCTGAG 
CACGGTGAAG CCATTTACAA AAAGTTCGTT CATGCCCTTA GAGCAAAAGG TATGGCTGTC 
TCTACCGGCG AGTTTGGTGC AGACATGCAA GTAGGCCTTG TTAACGATGG GCCTGTAACC 
TTTCACTTTA ACGTGTAG
 
Protein sequence
MIGLIQRVSE ANVTVAGEVI GEIGKGMLVL LGVEKEDGDA EIEKLANKLC RYRMFSDEDG 
KMNLNIEQVG GEILVVSQFT LVADTQKGNR PGFSRGATPE HGEAIYKKFV HALRAKGMAV 
STGEFGADMQ VGLVNDGPVT FHFNV