Gene MADE_03495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03495 
Symbol 
ID6777371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3768534 
End bp3770207 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content45% 
IMG OID642756943 
ProductSignal transduction histidine kinase 
Protein accessionYP_002127781 
Protein GI196158292 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTGT CGCTACGATT TAAAACAATT ACCGGCGTTG CATCGATTGC AGCCCTGCTG 
CTATTGGTAC TGATCATTAC GGTATTTCAA CTGTTAAACG ATCTGGTTGA CAATAATGTG
CAAAAGTCTG CCGATACCAG CGTCGCTTTA TTTGTTTCTA CAACGAAAAA CGCCTTTCTA
AGTTACGACC TTGCTTCCCT TGATGCTGAT GTATCCGAAA TATTAACCAA CCCCAATATT
TCTTACGTAA AAGTTAAGGA CAAGCTAGGT AACGTGTTTG TTGGCAAGGG GAATCAACAA
GCGCTAAATC GCCCTTTCGT TGCGGACGAT TCGGTGTCAG AAGCAGATGA TGGCATCTAT
GATACGCGCG CGCCCATCAT GGTAAATAAT TCCCTTTACG GCTATGTAGA AATTGGCTTG
AACATCGCCT CTGTTACCGA ATCGGTATCT CGTGTTAAAA ACTGGACGCT TACGCTAGCC
CTCATGGAGT TTATCCTCGT TGGCTTGTGC TCGTATATCT TGGGTTCATA CCTGATGTCG
CAACTTCGCC AGTTACATCA GGGTGCGAAG CATCTTGGCG ATGCAGTAAA AAACAATGAC
TACAGGGAAG TCTTTGTTCC TGTTCGCGGT AATGACGAAT TAAGCGAACT GGCTGAGGCC
TTCAATCAAT TAGTAGAGCG TTTAAAAGAA GAGCATGAGC AAAGGCAGCG TGCACAGGAT
GAACTGAAGG AACTCAACAC CCTGCTCGAA GAAAAAGTGC AGGACAGAAC CGCCCTATTG
CACCAAAAGA ATTTTCAGCT AGAAGAAGCC AACAAAGACC TTAAAGAAAC ACAGGTTCAA
TTACTTCAAG CGGAGAAAAT GGCATCGGTC GGTCAGCTAG CTGCCGGGGT AGCTCATGAA
ATTAATAACC CAGTTGGGTT TGTTAGTAGC AATATCTCTA CATTAAGCGA GTATGTTGCC
ACATATCAAA TGGTATTTTC TCAAATAAAC GTGGTAATAG CGGCTGAAAA TGAACAAGCG
CGACTTAAAG CACTTACTGA ACTAAAAAGC ATGCTCGCCA ATCAAGACAT GGCTTTTATT
AACGAAGATA TTGCAGAGTT ATTAACCGAC TCCCGTGAGG GGCTACAACG AGTGGCTGAG
ATAGTAAAAG GTCTTAAGAT TTTCTCACGG GTTGATAGCG ATCATATGCA ACAGCACAAC
ATTAATGACT GCGTACGTAC TACGCTGGCT ATGGTTAACA ATCAGCTGAA ATATATTTGT
ACTGTAGAAA CCCACTTGGG CAGAGTACCA GATATTCCCA TGAACGTTGG CAAGGTGTCT
CAAGTTGTTA CCAACCTGCT GATTAATGCT GGACAAGCAA TTGAAGCCAC TGGCAAAAAT
GGTAAAGTGA TAATTACTAC CTGTACGTTA AACGGCTTTG TTGAACTGCG TGTTGAAGAC
TCAGGGTGCG GCATTCCCCC TAGCCATTTA GATAAGCTCT TCAACCCGTT TTTTACAACC
AAGCCCGAAG GCCAAGGCAC GGGGCTAGGT CTTTCCATTT CATTTGGCAT TGCTCAAGAG
CACGGTGGCA CATTGTCAGC AAGCAGTGTA GAAGGCGAAG GTAGCACGTT CACCCTTGCA
CTCCCTGTTG AGCCTGCTCC GTCAGTTCCC CTCATGGAAA AAGAGAGTGA ATAA
 
Protein sequence
MRLSLRFKTI TGVASIAALL LLVLIITVFQ LLNDLVDNNV QKSADTSVAL FVSTTKNAFL 
SYDLASLDAD VSEILTNPNI SYVKVKDKLG NVFVGKGNQQ ALNRPFVADD SVSEADDGIY
DTRAPIMVNN SLYGYVEIGL NIASVTESVS RVKNWTLTLA LMEFILVGLC SYILGSYLMS
QLRQLHQGAK HLGDAVKNND YREVFVPVRG NDELSELAEA FNQLVERLKE EHEQRQRAQD
ELKELNTLLE EKVQDRTALL HQKNFQLEEA NKDLKETQVQ LLQAEKMASV GQLAAGVAHE
INNPVGFVSS NISTLSEYVA TYQMVFSQIN VVIAAENEQA RLKALTELKS MLANQDMAFI
NEDIAELLTD SREGLQRVAE IVKGLKIFSR VDSDHMQQHN INDCVRTTLA MVNNQLKYIC
TVETHLGRVP DIPMNVGKVS QVVTNLLINA GQAIEATGKN GKVIITTCTL NGFVELRVED
SGCGIPPSHL DKLFNPFFTT KPEGQGTGLG LSISFGIAQE HGGTLSASSV EGEGSTFTLA
LPVEPAPSVP LMEKESE