Gene MADE_03485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03485 
Symbol 
ID6777279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3758869 
End bp3759351 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID642756933 
Productregulatory protein, AsnC/Lrp 
Protein accessionYP_002127771 
Protein GI196158282 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATG ATAAACAAAA CGGAATAGAT GCTACGGACA AGGCAATTTT AGGGTTGCTG 
CAACACAATG GCGACATGCC CGTTGCAGAG ATTGCCGAAC AAGTGGGTTT AACCGTAACG
CCATGCTGGC GCCGCATTCA AAAGCTTGAA GAAAAGGGGA TTATTTCTAA GCGAGTAGCC
CTATTGCAGG CCAGGCAGTT AGGCCTAACG ATGACCGTGT TTGTACAAGT AAAAGCCGGG
CGGCACGATG GAAAATGGCT AGCGTCTTTT GCTAAACACG CGGCTTCTTT TGATGAGGTG
GTAGAGTGCT ACCGTATGTC GGGGGAATAC GATTACTTGC TGAAAGTTTT GGTAACCGAC
ATGGACTGCT TTGACCACTT CTACAAACGC CTTGTGAACG GTCTTGAGTT TTCAGACGTT
ACCTCTAGCT TCGCTATGGA GCAAATCAAA TATACTACAT CGGTGCCGCT CAACCACCTT
TAG
 
Protein sequence
MRNDKQNGID ATDKAILGLL QHNGDMPVAE IAEQVGLTVT PCWRRIQKLE EKGIISKRVA 
LLQARQLGLT MTVFVQVKAG RHDGKWLASF AKHAASFDEV VECYRMSGEY DYLLKVLVTD
MDCFDHFYKR LVNGLEFSDV TSSFAMEQIK YTTSVPLNHL