Gene MADE_03482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03482 
Symbol 
ID6777264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3755268 
End bp3755819 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID642756930 
ProductHelix-turn-helix, type 11 
Protein accessionYP_002127768 
Protein GI196158279 
COG category[K] Transcription 
COG ID[COG1510] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTT TAATTACTTC TGCTGTTATG CACTTTGGCG AAATGGGAAG TCGCTGGGGT 
TTTAATAGAA CGGTGGGGCA AATACTTGCT CTTATTGTTC TTAATGAAGA GCCAATTTCG 
GCACAGGAGA TTGCTGACGC GCTGAATATC TCCAGAGGCA ATACAAGTAT GGGCTTAAAA 
GAGCTTCAGT CGTGGCGTTT GGTTAAGCAG CACCATGTTC CAGGCGAAAG GAAAGAATTT 
TTTGTGCCTG CAGGTGATAT CTGGACATTG GCTAACCGGG TATTTGAAGA GCGCAGGAAG 
CGAGAGATAG ATCCAACCAT GAGCTTACTT CGGGATTTGT TACTCGATGC ACCTGCCAAT 
GAAAAAGAAG CAAACGCTCA ACATAAACTG AACGAAATTC ACGATTTACT CGAATCAATT 
ACGGCATGGT CCGAAGAGCT TCAAAATCTT GGACCAGAAA AGCTTAACAC GCTGATGAAG 
CTAGGTTCTG GCGTAGGCCG TATGCTTGAG CTTAAGGACA AGCTACTTCC AGGAAAAAAC 
AGCGTTAACT AA
 
Protein sequence
MTPLITSAVM HFGEMGSRWG FNRTVGQILA LIVLNEEPIS AQEIADALNI SRGNTSMGLK 
ELQSWRLVKQ HHVPGERKEF FVPAGDIWTL ANRVFEERRK REIDPTMSLL RDLLLDAPAN 
EKEANAQHKL NEIHDLLESI TAWSEELQNL GPEKLNTLMK LGSGVGRMLE LKDKLLPGKN 
SVN