Gene MADE_03453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03453 
Symbol 
ID6778761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3725106 
End bp3726131 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content48% 
IMG OID642756901 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_002127739 
Protein GI196158250 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0486412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATTT TAGGAATAGA AACATCTTGT GACGAAACCG GCATCGCTGT CTATGACGAT 
GAGAAAGGTT TGTTGTCCCA CGAATTATAT AGCCAAGTGA AGCTACACGC CGATTATGGT 
GGTGTAGTGC CAGAACTTGC GTCGCGGGAT CACGTAAGAA AAATTATTCC TTTGATAGAA 
AAAGCCATGG AAGATGCCAA CACGCAACCA TCAGACATCG ACGGCGTTGC TTTTACGCAA 
GGCCCAGGTC TGGTAGGCGC ATTATTGGTC GGTTCATCAG TGGGTCGTTC ATTGGCCTAT 
GCGTGGAACG TACCTGCGGT AGGTGTTCAC CATATGGAAG GGCATTTATT AGCGCCTATG 
CTCGAAGACG ACGCACCGGC ATTTCCTTTT ATTGCGCTTT TAGTATCCGG CGGCCACTCG 
ATGCTGGTTA AAGTAGAAGG TATTGGTCAA TACGAAGTGC TTGGGGAATC TATAGATGAT 
GCGGCGGGCG AAGCCTTTGA CAAAACCGCT AAACTCCTTG GCTTAGATTA CCCAGGCGGG 
CCGCTTTTGG CGAAGCTGGC TGAAAAAGGC GAAGCAGGGC ATTACAAGTT CCCTCGCCCT 
ATGACAGACA GACCTGGTCT TGATTTTAGC TTCAGTGGCT TAAAGACCTT TGCGGCTAAT 
ACTATCCGCG ACGCTGATTT AACAGGCGAT AATGCAGAGC AAATTAAAGC CAACATTGCT 
TATGCGTTTC AAGAGGCAGT GGTTGATACA CTGATAATAA AGTGCAAGCG GGCGTTAAAA 
CAAACGGGAA TGAAGCGCCT TGTTATAGCA GGCGGCGTAA GTGCGAACAC CATGCTACGC 
AGTGAGATGA AAGCGCTAAT GCAAGCGCTA AAAGGTGAAG TGTTTTATCC TAGCTTGGCG 
TATTGTACTG ACAATGGAGC CATGATTGCT TATGCCGGCA TGCAGCGATT AAAAGCAGGG 
GAAACCTTAG CGCTTTCCTC TCAAGCAAAG CCGCGCTGGC CTCTTGACAC CTTATCGGCA 
ATTTAA
 
Protein sequence
MRILGIETSC DETGIAVYDD EKGLLSHELY SQVKLHADYG GVVPELASRD HVRKIIPLIE 
KAMEDANTQP SDIDGVAFTQ GPGLVGALLV GSSVGRSLAY AWNVPAVGVH HMEGHLLAPM 
LEDDAPAFPF IALLVSGGHS MLVKVEGIGQ YEVLGESIDD AAGEAFDKTA KLLGLDYPGG 
PLLAKLAEKG EAGHYKFPRP MTDRPGLDFS FSGLKTFAAN TIRDADLTGD NAEQIKANIA 
YAFQEAVVDT LIIKCKRALK QTGMKRLVIA GGVSANTMLR SEMKALMQAL KGEVFYPSLA 
YCTDNGAMIA YAGMQRLKAG ETLALSSQAK PRWPLDTLSA I