| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03445 |
|---|
| Symbol | |
|---|
| ID | 6776890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3717621 |
|---|
| End bp | 3718457 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756893 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_002127731 |
|---|
| Protein GI | 196158242 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAC AGAACGCGCT TTCAACCATC TTGGTTGAAA AAATTAACAA CGATACTCTC
GTCCTTCCTA CACTTCCTGC TATCGCATTG AAAGTTCGTA AAGCAGCTGA CGACCCTGAT
ATAAACCTAA ACGCAATGGG CGAGGTTATA GGTCAGGACC CGTCATTAAG CGCAAGAATG
ATTAAAATTG CTAATAGTGC TTATATGGGG CGTAGCGTTA AAGTGACTTC AATTAGTCAG
GCGGTAACGC GTATTGGTCT GCGACAAATT AAGAACATTT CTACTGCCTT GGCAATGGAA
CAGCTATTTG TATCGAAAAA CGACGTGGTT GCTCGGTATT TACAGCAGGA ATGGGCCAAT
ACTGTGAACA TAGTGTCTAG TGCCATGGCG GTTTTACAGC TTTATATCGC CCGGACTAAA
AATCGTGAAA TGAGCATGGA TACTATGACT TTGGCAGCCC TTGTTCATAA CATTGGTGTG
TTGCCTATTT TAACCGAAGC AGAGCGCCAC CCTGAAGTAT TTGCTAACCC AACATTTCTT
GAAGTTGCGA TAGATCAATT GTCGGGGCGA ATCGGCGCGA GCATAATGAG AGAATGGGGC
TTCGGCGATA GTTTCGTTAA TGTGGCTAAA AACTGGAAAG ATTTAAGCTA CCTGCCTGAT
AACCTAAGCT ATATCGATTT TGTACGTGTT GGCGCGGCGG TTTCAGGGGC TGCCGGCAGT
CAAAAAGATG CTATTTTAAA CTTAGCGATA CAGCGCGGTG TTGTAGAAGA TATGGGTGAA
CTACACTCTG ATGAATTCGA AGAGCTAAGT AGCGCAGCGA AGCAAATTTT CTTATAA
|
|---|
| Protein sequence | MSTQNALSTI LVEKINNDTL VLPTLPAIAL KVRKAADDPD INLNAMGEVI GQDPSLSARM
IKIANSAYMG RSVKVTSISQ AVTRIGLRQI KNISTALAME QLFVSKNDVV ARYLQQEWAN
TVNIVSSAMA VLQLYIARTK NREMSMDTMT LAALVHNIGV LPILTEAERH PEVFANPTFL
EVAIDQLSGR IGASIMREWG FGDSFVNVAK NWKDLSYLPD NLSYIDFVRV GAAVSGAAGS
QKDAILNLAI QRGVVEDMGE LHSDEFEELS SAAKQIFL
|
|---|
| |