Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03439 |
Symbol | |
ID | 6778786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3710240 |
End bp | 3711541 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756887 |
Product | phosphate regulon sensor protein PhoR |
Protein accession | YP_002127725 |
Protein GI | 196158236 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.350506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTACC CTTTCTCTTG GTTGAGAAGT ACACTGCGAT TAGTGCTATT CCTTGTGGTT TTTGCGCTGG TGGGGTGGTA TTTGGATGAC ATGTTGTTCG CAGTAGCGAT AGGTGCAACC CTGCTCTTAT TGTTTAATTA TTGGCACCTT TATAAACTTA ACCGTTGGCT ATGGCATAGC CGTAAGATGT CTCCACCTAC TGTGCGTGGC GTGTGGGAGC ATATCTATGA AGGCATTTAC TATCTTCAGC GCCGTAACCG CAATAAACGC AAGGAATTGG GCGAATTGGT TAAGCGCTTC AGAGAAGGTT CTGAAGCCCT GCCAGATGCC GCTGTGGTAG TTGATGCTAA GGCGTGTATT ATTTGGTGTA ACCGCCTAGC GCGACTAGAT TTAGGGCTTA AGTGGCCACA GGATTCAGGC CGTCGAATAG ACAACTTGCT GCGACATCCT GAGTTTATAC AGTACTTTCA TGCAGGTAAC TATAAATACC CCATTGAAGT ACCGTCGCCA ACTAATCCGA ATAAAACCTT TGAATATCGC ATCATGCCCT ACGGGGAAGA GCACTTGCTG CTTATTGCCC GTGATATAAC ACGGGTTTCT CAACTTGAAG AAATGCGCAA AGATTTTGTG GCCAATGTAT CTCATGAGCT TCGCACGCCG CTAACGGTGA TTAATGGATA TTTGGAAATT CTTCCTGTAG ATGAAGAATC AGACCCGTTT ATGCATAAAG CGATGAAGGA AATGACATCG CAAACCCATC GCATGCAAAA CCTGATAGAA GATTTGCTGG TATTGTCACG CATTGAGGCA AGTTCAGAAC GCATTTACGA AAACGTGGTC AATATTCCTA CAGTGCTAGC CCAAGTGGAA AGAGAAGCAC AGGCGCTCAA TAAAGAAAAG AACCACAAAA TAAACTTTCA TATTGATGAA GAGCTTTATG TATTTGGCGT AGAAACCGAA CTTAGAAGTG CTTGCTCAAA CTTGGTGTTC AATGCGGTGC ACTACACACC TGCCGGTGGT GAAATTAATG TGTACTGGCG ACGTAAACCC AATGGCGCGC AATTTTCTGT GGTAGATAAC GGTGATGGTA TTGAGCCAAA TCATCTAAAC CGCCTTACCG AGCGCTTTTA TCGCGTGGAT AAAGCGCGCT CTCGCAAAAC CGGCGGATCG GGGCTGGGCC TATCCATTGT AAAACACGTG CTAAGTCATC ATAATTCTCG CCTAGAGATT ACGAGTACAC TTGGCGAGGG CAGTAACTTC TCGTTTGTAT TAGATAAAGA ACTTATTGCT GAGCAGCTGT AG
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Protein sequence | MYYPFSWLRS TLRLVLFLVV FALVGWYLDD MLFAVAIGAT LLLLFNYWHL YKLNRWLWHS RKMSPPTVRG VWEHIYEGIY YLQRRNRNKR KELGELVKRF REGSEALPDA AVVVDAKACI IWCNRLARLD LGLKWPQDSG RRIDNLLRHP EFIQYFHAGN YKYPIEVPSP TNPNKTFEYR IMPYGEEHLL LIARDITRVS QLEEMRKDFV ANVSHELRTP LTVINGYLEI LPVDEESDPF MHKAMKEMTS QTHRMQNLIE DLLVLSRIEA SSERIYENVV NIPTVLAQVE REAQALNKEK NHKINFHIDE ELYVFGVETE LRSACSNLVF NAVHYTPAGG EINVYWRRKP NGAQFSVVDN GDGIEPNHLN RLTERFYRVD KARSRKTGGS GLGLSIVKHV LSHHNSRLEI TSTLGEGSNF SFVLDKELIA EQL
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