| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03436 |
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| Symbol | |
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| ID | 6776873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3703242 |
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| End bp | 3705812 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642756884 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002127722 |
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| Protein GI | 196158233 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTCG CTCAATCAAA TGAAGAAGAA GTGATTGAGG AAGTTGTCGC TACCGGTACG
CGCCTTAAGG GCACGGCAAC GGCAGTAATG GAAGAACGAA AAAATCAAGC TTTCGTAGCT
GACATCATGG GTGCTGAGCA GATCGCTCGT ACTGGTGACA GTGATGCTGC GGGTGCACTT
CGCCGTGTAA CTGGTCTAAC ACTGGTAGAT GGTCGTTTCA TCTACGTTCG TGGTCTTGGT
GAGCGTTACT CATCAACACA ATTAAACGGC GCAATCGTGC CAAGCCCAGA TCCAACGCGT
AACGTAATAC CTCTCGACTT GTTCCCGTCG AGCATTATCG AAAGCCTTGC GGTTCAGAAA
TCGTATTCAC CATCTATGCC CGCGGCATTC GGTGGTGGTA ACGTAAATAT CCGATTGAAA
TCTATACCTA CACAGCGTGT TTTCAACGTA TCAGCTGCGG TTGGTATCGA TACGGAAAAC
TCTGGTGATG TGTTAGATTA TGCTGGTGGT GGTCGCGATT GGACAGGTGA AGACGACGGT
ACTCGTGGCG TTTCAGCGGC TATTCAAGAA CGTTGGGATT CAAAAAATTT CTTAGACGAT
CTTGAGCCAG AAGAAGCATT GGAACTGTTC AAAGGTGTTA ATAGAGAATA CGGGCTAGAA
AGAGAGTCTG CCGATCCTGA CATGCGCGTG AATGTCACTT ATGGTGACAG CTATGATTAC
GATGAAGACT GGCGCTTTGG CTTTTTGGTA ACTTCACGTT ATTCAGCCCA AACCCGCTCT
TCTGAAGAAT ACGAGCTACA AGACCCTGAC TTAGTCGGCG ATGACATTAT CAATGTACGC
TTCTTTGACG ATATCCAAGG TACAGAGCAA ACGGTGACTT GGTCTTCACT ATTAACACTA
GGTGTAGACT ATAACCGTCA ACATCGTATT GATTACAGCC TTATCGTGCT AAACGATACG
CGCGACGAAA TCCGCGAGAT GTTCGGTAAT ACTGAAAACC TAAACCAAGC AGAAGGCTTG
CGTATTAGAG ATATTGATGT TCAGTACGAA GAACGCTCGC TATATACCAA TCAGCTTAAA
GGCCAGCATA CCATCCCAGA GCTAAACTTC ATGGGTATTG ACTGGACATA CTCATTAGGC
CGCTCGGTAC GCTATGCGCC AGGTAACTTC AATGCACGCT TCGTTATGGA AGATGTGAAT
GAAGATGGTA TTTTTGACGA TGAAAACGAA ATCTTCTTAT CTGATGCACA AACTGCTGCT
CGTTATACTT TCCAAAATCT TCACGACCGC TTGGAGAACT TTGGCTATAA CGTGACTTAC
CCAATGACAA TGGGTAAGTG GGAAACTGAG TACAAAGTGG GTGCAAGCTT TGTAACCAAA
ACTCGTACTG CAGAAAACCG CCGTTTCGAT ATCAATACGT TAGGTGTTGA AGACCGTTCA
ATATTAGATG GTAACGACTT TAGCGAAATC TTCAGCGACA GCGTTTTAGA CACCTTGTCT
TTGTCTAGCC GACCTATCAT TCGTGATACG ACTATTGCTG GTGATGACTA TGTAGCGGGT
CAGAAAATTG ATGCGTACTA TCTAGAAGCT GATTTCTTCT ATGACAACAA ATGGCGCTTC
ACTGGTGGTG CTCGTTATGA AGACTTCCGT CAGGTAGTGG CGCCATTAGA TCCGCGTACA
AACCAATTTG ACTTGAGTGA CGAAGCGGAT CGTTCACAGT TAGCGTTTCA AGAAGACGGG
TTCTATCCAG CGCTTGCTGT AACTTACTTC TTAGAAGACG ATATGCAGTT AAGAGCGAGC
ATAGGTCAAA CAGTTGTGCG TCCGGATCTT CGTGAAGTGT CATCAGCAAC TTACCTAGAC
CCATTAACTA ACTTCCCGAT TGCGGGTACA CCTGGTGTAA GCACAACAGA TATCATTAAC
TATGATTTAC GTTGGGAATG GTACCGTGAA GCAGGCAACA ACGTATCGGT AGGCTTATTC
TACAAAGATA TGGAAGCGCC AATTGAATCG GTACAATCTC CAGCTCAGGA TGGTCCACCG
CTAATTCGTA TCGCTAATGC AGAATCTGGT GAGGTCTATG GTGTCGAAGT TGAATTCCTT
CAAGACTTGG CCTTTATTGG CGACGGTATC TGGGACAACT TGTTTACTAC AGGTAACATC
ACTGTCAGTG ATTCTGAAAT CGTGTTAGAT CGTCAGAATA TTGTTGAGCA AACCGGTGTT
TCTGCGGCGA TTACTAATGT TGAGCGTCGT ATGACGGGTC ACTCTCAGTA TGTACTTAAC
ATGCAGTTGG GTTATGACTC AGATAACGGT GAACACTCTG CCTCACTCGT CTACAACGTA
TTTGGTGAGC GTATTCTAAT TCCCGGTATC GACGGTTTCG ACGATAACTT CGAACAACCA
TTCCATTCAC TTGATATGGT GTACAAGTAT TACCCAGACT TTAATAGCAC TGTCACATTA
CGCGTTCAAA ATATCCTAGG TGAAGATCGT GAAATTGAAT TCAATGATAC GTTGCTTAGG
TCGGAGACAA GGGGTACAGG TATTAGGTTG TCATATAAAT ATGACTTCTA A
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| Protein sequence | MAFAQSNEEE VIEEVVATGT RLKGTATAVM EERKNQAFVA DIMGAEQIAR TGDSDAAGAL
RRVTGLTLVD GRFIYVRGLG ERYSSTQLNG AIVPSPDPTR NVIPLDLFPS SIIESLAVQK
SYSPSMPAAF GGGNVNIRLK SIPTQRVFNV SAAVGIDTEN SGDVLDYAGG GRDWTGEDDG
TRGVSAAIQE RWDSKNFLDD LEPEEALELF KGVNREYGLE RESADPDMRV NVTYGDSYDY
DEDWRFGFLV TSRYSAQTRS SEEYELQDPD LVGDDIINVR FFDDIQGTEQ TVTWSSLLTL
GVDYNRQHRI DYSLIVLNDT RDEIREMFGN TENLNQAEGL RIRDIDVQYE ERSLYTNQLK
GQHTIPELNF MGIDWTYSLG RSVRYAPGNF NARFVMEDVN EDGIFDDENE IFLSDAQTAA
RYTFQNLHDR LENFGYNVTY PMTMGKWETE YKVGASFVTK TRTAENRRFD INTLGVEDRS
ILDGNDFSEI FSDSVLDTLS LSSRPIIRDT TIAGDDYVAG QKIDAYYLEA DFFYDNKWRF
TGGARYEDFR QVVAPLDPRT NQFDLSDEAD RSQLAFQEDG FYPALAVTYF LEDDMQLRAS
IGQTVVRPDL REVSSATYLD PLTNFPIAGT PGVSTTDIIN YDLRWEWYRE AGNNVSVGLF
YKDMEAPIES VQSPAQDGPP LIRIANAESG EVYGVEVEFL QDLAFIGDGI WDNLFTTGNI
TVSDSEIVLD RQNIVEQTGV SAAITNVERR MTGHSQYVLN MQLGYDSDNG EHSASLVYNV
FGERILIPGI DGFDDNFEQP FHSLDMVYKY YPDFNSTVTL RVQNILGEDR EIEFNDTLLR
SETRGTGIRL SYKYDF
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