Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03431 |
Symbol | |
ID | 6776756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3699356 |
End bp | 3699964 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642756879 |
Product | putative TonB2 protein |
Protein accession | YP_002127717 |
Protein GI | 196158228 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACGAT ATTTAATCGC ATTTGTTATT TCCCTTGCGA TCACGTTAGG CCTGTTCTTC TTGATGCAAT CGCTTATCAA GATGGGTGGC AGCGCCTTAA CTGAACCGCC CAAGGGAAGC GTGCTTGACT TTGTAAGGGT TAAGCAGGAC GAGCAGGTTG AGAAAAAAGA TCGTAAGCCG AAGAAGCCAC CTAAGCCAAA AGAGCCACCT CCGCCAATGG AGCAACCTCA AATGGACTCG CCTTCTCCTG ATGCAGAAGG TACGTCGATG GACTTTGGTG CCGAAGTGGG AGACGACATC TCTTTAGATG GGGGCTTAGC CCTTGAGTCA GGCGACGGTG AATACCTTCC AATCGTTAAA GTTGCGCCGG TATACCCACG ACGTGCACTT CAGCGCGGTA TCGAAGGCTT CGTTATTGTG GAATTTACAG TAACTAAGCA AGGTGCGGTG CGCGACCCCA TTGTTGTAGA AGCGAACCCA GAAGGTATAT TCGAACAAGC GGCCATTGAC GCTGCAATGA AGTTCAAATA TAAACCTCGT GTGGTAAATG GCGAAGCAAC AGAGGTTTCT GGTGTGCAAA ACCGTATTAC GTTCCAAATT GACGGGTAA
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Protein sequence | MPRYLIAFVI SLAITLGLFF LMQSLIKMGG SALTEPPKGS VLDFVRVKQD EQVEKKDRKP KKPPKPKEPP PPMEQPQMDS PSPDAEGTSM DFGAEVGDDI SLDGGLALES GDGEYLPIVK VAPVYPRRAL QRGIEGFVIV EFTVTKQGAV RDPIVVEANP EGIFEQAAID AAMKFKYKPR VVNGEATEVS GVQNRITFQI DG
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