Gene MADE_03420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03420 
Symbol 
ID6776753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3681171 
End bp3683837 
Gene Length2667 bp 
Protein Length888 aa 
Translation table11 
GC content49% 
IMG OID642756868 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_002127706 
Protein GI196158217 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACAA GACCGTTTAC TCCCATTGCG CAAGCTAACT TAGAGGAAGA GACTGTGTTA 
CAAGACTATC GCAAACACGT TGAAGAACGT GCACAACAAG GCATTCCCCC AAAAGCGCTT
AATGCCGAAC AGGTTGCTAG CCTCGTCGAT TTATTAAAAA ATCCGCCAGA GGGTGAAGGC
GAATTCTTAC TAGAACTACT TTCAGAACGT GTGCCGCCTG GCGTCGATGA AGCGGCTTAC
GTTAAAGCCG GTTTTTTAAG TGCCATCGCA AAAGGCGAAG ACAGCTGCGA GCTCATCTCT
AAGGAAAAGG CAGTAACCCT ATTGGGAAAC ATGCACGGCG GTTACAACAT TGCCACGCTG
GTAGAACTGC TTGATGACGA GAGTCTAGCG CCGTTGGCTG CCAAAGAGCT TAAACACACG
CTGTTAATGT TCGATGCTTA TCACGATGTG GAAGAGAAAC ACAAAGCGGG TAACGAGTAC
GCTACTGACA TTATCAAGTC TTGGGCCGAA GGTGAGTGGT TTACTTCGCG CAAACTCATG
GATGACAAAA TTACCTACTC AGTATTTAAA GTAACCGGCG AAACCAATAC TGATGATTTA
TCTCCAGCGC CCGACGCATG GTCTCGCCCT GATATTCCTC TGCACGCCCT TGCGGCTTAC
AAAATGCCTC GCGAAGGATT GGAGCCCGAA GAACCCGGCG TTAAAGGCCC AATGACACAA
ATAGAAGAAG TCAAAAGTAA AGGATATCCG GTTGCTTTTG TGGGTGATGT TGTCGGTACC
GGATCGTCAC GTAAGTCGGC GACGAACTCA GTGTTATGGT TCTTTGGCGA AGATTTACCG
GGCGTGCCGA ATAAACGTGG CGGTGGTGTA TGTATCGGCT CAAAAGTTGC GCCTATTTTC
TTTAACACCA TGGAAGATGC TGGCGCACTG GTTTTCGAAG CCGATGTGGA AAAAATGAAT
ATGGGGGATG TGATAGATAT CTACCCATTT GAAGGCAAAA TTACCAACCA CGAAACCGGT
GAGCTTCTCG CAGAATATAG CTACAAGTCG AAAGTGATTT TAGATGAAGT TCGTGCGGGG
GGACGCATTA ACCTGATTAT TGGGCGCGGT CTTACAGAGA AAGCCCGAGA GACGTTAGGT
TTAGGTCCAA CAGATCTTTT CCGCACGCCT GAACAACCAA AAGACAGCGG AGCGGGTTTC
TCGTTAGCGC AGAAAATGGT GGGCAAGGCT TGTGGTGTTG AAGGCATTCG CCCGGGCACT
TACTGCGAGC CTAAAATGAC AACTGTGGGC TCGCAAGATA CCACAGGGCC TATGACCCGC
GATGAGCTCA AAGACTTAGC TTGTCTTGGT TTTACTGCCG ATTTAACCAT GCAGTCATTC
TGTCACACAG CGGCTTATCC TAAGCCGGTG GATATTGAAA CCCAGCACAC ATTGCCTGAT
TTTATTATGA ATCGCGGTGG GGTATCGCTT CGCCCCGGCG ATGGCATTAT TCACAGCTGG
TTAAATCGCA TGTTGTTGCC TGACACAGTA GGAACAGGCG GCGACTCCCA TACCCGTTTT
CCATTAGGTA TTTCGTTCCC AGCGGGCTCA GGGCTGGTGG CGTTTGCTGC GGCCACGGGC
GTGATGCCTC TTGATATGCC TGAATCTATT CTTGTGCGCT TTAAAGGGGA AATGCAGCCG
GGCATTACCT TAAGAGACCT TGTACACGCT ATTCCTTTGT ACGGTATTAA ACAAGGGCTA
TTAACGGTAG AGAAAAAAGG CAAAATAAAC GCCTTTTCTG GCCGTATTCT AGAAATTGAA
GGGTTAGAAA ACCTGACGGT AGAGCAGGCG TTTGAGTTAT CCGATGCATC GGCAGAGCGT
TCAGCGGCAG GTTGTACCAT CAACCTTTCT GAAGAATCGA TTGCCGAGTA CCTGCGTTCA
AATATCACTA TGCTTCGCTG GATGATTAAC GAAGGTTACG GCGATCCGCG CACATTAGAG
CGCCGCGCTC AGAAAATGGA AGAGTGGCTC GCAAATCCTG AGCTAATGCG CGCCGATGCC
GACGCGGAAT ATGCTGAGGT TATCGAAATC GACCTTAATG ATATTAAAGA ACCCATTGTG
TGCTGCCCGA ATGATCCAGA CGACGCGAAA ACCTTGTCTG AGGTGGCGGG TGATAAGGTG
GATGAGGTCT TTATTGGTTC ATGCATGACA AACATTGGTC ACTTCCGCGC TGCCGGTAAA
TTGCTTGAGC AGTTTAATAA AACCTTGCCA ACTCGTTTGT GGATGTCGCC ACCAACGAAG
ATGGATAAAG CCCAGTTGAT GGAAGAGGGG TATTACAATA TTTATGGTCG TGTTGGTGTG
CGCACCGAAA TGCCTGGATG TTCTTTGTGT ATGGGGAACC AAGCCCGTGT AGACGCTGGC
GCTACCGTAC TTTCAACCTC TACCCGTAAC TTCCCGAATC GCTTGGGTGA CGGCGCAAAC
GTGTACCTGA CATCCGCTGA ACTTGCTGCA GTAGGAGCAA TTGTAGGGCG CATTCCAAGT
GCCGAAGAGT ACATGGAGTA CGCCAGCAAG ATTAACGCTA TGTCGGGTGA AGTATTCCGC
TACTTAAACT TCGACAAAAT GCCAAGCTTT AAGAAGGCAG AAGAAGAGGC AAAAGCGCGC
ATTATTCCGA CATTGAATGT TGCTTAA
 
Protein sequence
MRTRPFTPIA QANLEEETVL QDYRKHVEER AQQGIPPKAL NAEQVASLVD LLKNPPEGEG 
EFLLELLSER VPPGVDEAAY VKAGFLSAIA KGEDSCELIS KEKAVTLLGN MHGGYNIATL
VELLDDESLA PLAAKELKHT LLMFDAYHDV EEKHKAGNEY ATDIIKSWAE GEWFTSRKLM
DDKITYSVFK VTGETNTDDL SPAPDAWSRP DIPLHALAAY KMPREGLEPE EPGVKGPMTQ
IEEVKSKGYP VAFVGDVVGT GSSRKSATNS VLWFFGEDLP GVPNKRGGGV CIGSKVAPIF
FNTMEDAGAL VFEADVEKMN MGDVIDIYPF EGKITNHETG ELLAEYSYKS KVILDEVRAG
GRINLIIGRG LTEKARETLG LGPTDLFRTP EQPKDSGAGF SLAQKMVGKA CGVEGIRPGT
YCEPKMTTVG SQDTTGPMTR DELKDLACLG FTADLTMQSF CHTAAYPKPV DIETQHTLPD
FIMNRGGVSL RPGDGIIHSW LNRMLLPDTV GTGGDSHTRF PLGISFPAGS GLVAFAAATG
VMPLDMPESI LVRFKGEMQP GITLRDLVHA IPLYGIKQGL LTVEKKGKIN AFSGRILEIE
GLENLTVEQA FELSDASAER SAAGCTINLS EESIAEYLRS NITMLRWMIN EGYGDPRTLE
RRAQKMEEWL ANPELMRADA DAEYAEVIEI DLNDIKEPIV CCPNDPDDAK TLSEVAGDKV
DEVFIGSCMT NIGHFRAAGK LLEQFNKTLP TRLWMSPPTK MDKAQLMEEG YYNIYGRVGV
RTEMPGCSLC MGNQARVDAG ATVLSTSTRN FPNRLGDGAN VYLTSAELAA VGAIVGRIPS
AEEYMEYASK INAMSGEVFR YLNFDKMPSF KKAEEEAKAR IIPTLNVA