Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03416 |
Symbol | apaH |
ID | 6778825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3676033 |
End bp | 3676860 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756864 |
Product | diadenosine tetraphosphatase |
Protein accession | YP_002127702 |
Protein GI | 196158213 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0436512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAG GTAACACCTA CGTCATTGGC GATATTCAAG GCTGCTATGA CGGTCTTCGA CGCGCTTTAG ATAAAGTACA ATTTGATGAA GAAAACGATA CGTTGCTTGC CGTGGGCGAC CTTGTCGCTC GTGGTGAAGA CTCTTTAAGC ACCCTTCGTT TTCTAAAATC GCTTGGAGAT AACTTTAATA GCGTTTTAGG TAATCATGAT CTCCACCTAC TCGCCGTAGT CAACGGCATT CGCAAGCCTA AGAAATCAGA CAAGTTAGAC GACTTATTAA GCGCGCCTGA TTTGCCGGAA ATGATTGACT GGCTTAGACA ATTCCCCTTA GCCATGAAAA TAGATAAGCG CTCTATTATG GTCCATGCTG GGCTTTATCC TAAATGGTCA ATTGATAAGG CCGTGTCGTT AAGCGACGAA GTCAGCACCA TTTTGAAGTC AGATAATTAT GCTAATTTTC TAAGCAGCAT GTATGGAAAT AGCCCCGATA ACTGGTCTGA AAAATGGACC GGCGAAGCGC GGCTGCGCTT TATTGTTAAT GCCTGCACGC GAATGCGCTT TATTTACAGT GATGGAACGC TCGATTTCGA CAATAAATCT CACCCTAGCG CAGTGTCGCA CAGTACAAGT AGCACAATTA TGCCGTGGTT CGAACGAAAG AATGAACAGC TACTTGCCAA TCAGCGCGTT GTATTTGGCC ACTGGGCGGC CCTTTCAGGC CAAACTAATA GCGCTCAGTT TATTGGCTTA GATACGGGCT ACGTGTGGGG GCAAAGTATG ACCATGCTTA ACCTTAGCAG TGATACACTG GAAAACGTAA AAGCTTAA
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Protein sequence | MSQGNTYVIG DIQGCYDGLR RALDKVQFDE ENDTLLAVGD LVARGEDSLS TLRFLKSLGD NFNSVLGNHD LHLLAVVNGI RKPKKSDKLD DLLSAPDLPE MIDWLRQFPL AMKIDKRSIM VHAGLYPKWS IDKAVSLSDE VSTILKSDNY ANFLSSMYGN SPDNWSEKWT GEARLRFIVN ACTRMRFIYS DGTLDFDNKS HPSAVSHSTS STIMPWFERK NEQLLANQRV VFGHWAALSG QTNSAQFIGL DTGYVWGQSM TMLNLSSDTL ENVKA
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