| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03409 |
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| Symbol | |
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| ID | 6777381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3667961 |
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| End bp | 3668887 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756857 |
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| Product | tyrosine recombinase |
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| Protein accession | YP_002127695 |
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| Protein GI | 196158206 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA AAGAGCGAGA GTTAACCTAT GTGCCGCCAG CAAGTCAGGC ACATATTGAT
GGCTTTATCG AAATGCTATG GCTGGAAAAG GGTTTGTCAG AGCACACGCA ACAAAGCTAT
CGTACCGACC TTAGTAAGCT TGCTGTTTTC AGCAACAACC AAGGCATAAA AGACATTGCA
GTGCTGAGTA CTGAACAGCT TCAAGACTAC CTTGCTTATC GTCATGATAA AGGCTTATCT
ACCCGCAGTA CTCAACGCGC GCTAAGCGCT ATTCGCGCCT TCTTTGTTTA CCTTATTAGT
AAGCAGATAA GAGTGGACAG CCCGGTCTCT GCCTTGTCGA ACCCGAAAAC ACCTAAAGCG
TTACCTGCTT CACTCAGTGA GCAGCAGGTA GAAGATTTAC TTAATGCCCC CCAAACCGAC
GACCCCATTG AATGTAGAGA TAGAAGCATG CTTGAAGTGC TATACGCTAC TGGACTTCGA
GTCAGTGAAC TTATCGGTTT AACGATGGAC CAGATAAGCC TTCAGCAAGG TGTGGTACGA
GTGGTAGGCA AAGGTAATAA AGAGCGTTTA GTTCCGTTAG GTGAGGAAGC TATAGAATGG
CTGCTTACCT ATATCAAAAC AGCGCGACCT ATACTCGCTA CTAAAACCTC TGATTTTGTG
TACCTCAGTA AGCGGGGTCA AAAGATGACG CGGCAAACTT TTTGGCATCG CATTAAATAT
TATGCAGTAA AGGCGGGAAT AGAGCAGCAC TTGTCTCCTC ACACCCTAAG ACATGCTTTC
GCCACGCATT TGCTCAACCA CGGGGCTGAT TTGCGAGTGG TTCAAATGTT GTTGGGACAT
AGCGACCTAT CGACAACCCA AATATACACG CACGTAGCCA CTGAAAGGTT GCAAACGTTG
ATTCACAGTC ATCACCCAAG GGGCTAA
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| Protein sequence | MAKKERELTY VPPASQAHID GFIEMLWLEK GLSEHTQQSY RTDLSKLAVF SNNQGIKDIA
VLSTEQLQDY LAYRHDKGLS TRSTQRALSA IRAFFVYLIS KQIRVDSPVS ALSNPKTPKA
LPASLSEQQV EDLLNAPQTD DPIECRDRSM LEVLYATGLR VSELIGLTMD QISLQQGVVR
VVGKGNKERL VPLGEEAIEW LLTYIKTARP ILATKTSDFV YLSKRGQKMT RQTFWHRIKY
YAVKAGIEQH LSPHTLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HVATERLQTL
IHSHHPRG
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