Gene MADE_03401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03401 
Symbol 
ID6778891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3658625 
End bp3660808 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content49% 
IMG OID642756849 
ProductGTP pyrophosphokinase 
Protein accessionYP_002127687 
Protein GI196158198 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00113456 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATCGA CAAGAAAGGT CCACGAAGCC GACCGGCCAC CCTTCGAAGC GTGGCTAGAC 
AGCCTGAATT TACACGCAGA AACGAAAGAC AAGCTTAGCG CTGTATCGTC TATTCCTGAG
CGCTTGTTAG TCGGTCAGGA AATGGTAGAG ATTCTGTGTC AGCTCAATAT GGACGACGCG
ACGCTTCAGG CCGCCTTAGT ATTTCCTTAT TGCGAACAGC ACGCGCTAAG CGAAGACGAC
ATTCATGAAG AATTCGGCGG CGAAATTCGC GACCTGGTTG TTGGCGTGCG CAGAATGGAC
GCTATTAAGT CTTTACATGC CCGCAAAGTA AATGGGTCTG GGTTTGCAGA AAAGTCAGAC
GAACAGCACA TTGACAGCAT TCGCCGCATG CTGCTTGCCA TGGTTGAAGA CGTGCGTGCG
GTGGTTATTA AAATGGCCGA GCGCATTTGC GCACTGCAAC AGGTTAAAAA AGCGGATGAA
GAAACCCGCG TTATGGTGGC TCGAGAATGC GCTAGCATTT ACGCCCCGTT GGCAAACCGC
CTAGGCATTG GCCAGTTAAA GTGGGAACTT GAAGACCTCG CCTTTCGCTA CTTGCACCCT
ATTACTTATA AACAAATCGC AAAACAGTTA GACGGAAAGC GCAGAGAACG CGCCGAATAC
ATCAATGCTA TTGTTGACGA CCTTCAAGGC CTGCTAGACA AAGAGCAAAT CCGTGCTGAG
GTATACGGTC GACCTAAGCA TATTTTCAGC ATTTGGAAAA AAATGCAGAA AAAACGGCTT
ACGTTTGAAC AGCTATTTGA TATTCGCGCG GTGCGCATTA TTGCCGAGCG GCTACAGGAT
TGTTACGCAG CGCTAGGAAC GGTGCATGCT AGCTACAAGC ATTTACCTAA CGAGTTCGAC
GATTATATCG CGACCCCAAA ACCCAATGGT TACCAGTCGA TTCATACCGT TATCGTTGGG
CCTGAAAGTA AGTCGGTTGA GATTCAAATT CGCACTCAGA AAATGCATCA GGACGCAGAG
CTAGGCGTGG CGGCCCACTG GAAGTACAAA GAAGGCAGCA CGGGTAAACA GTCGGGCTAT
GACGAGCGCA TAAACTGGTT ACGTCGCATA CTCGCGTGGC AAGAAGAAGT GGCTGAATCT
GGCGATTTAG TTGAAGAGCT TCGCAGCCAA GTGTTCGACG ACCGGGTGTA TGTGTTTACG
CCGAAAGGGG ATGTGATTGA CTTGCCACAA GGTGCTACGC CTCTTGATTT TGCCTATTAC
ATTCACAGTA ATGTGGGCCA CCGCTGCATT GGCGCTAAAG TGAATGGGCG TATAGTGCCC
TTTACTTATT TGCTGCAAAG CGGCGATCAA ATAGAAGTGC TTACGGGTAA AGAGCCAAAC
CCTAGTCGAG ATTGGATGCA CCCCGGCCTC GGCTACGTGC ACTCATCACG GGCTAGAGCC
ACTATTCACT CGTACTTTAA AAAGCAGGAC AGGGACAAAA ACCTTGCTGC AGGTAAAGAG
CTTTTAGAGC GTGAATTACA GCGGGCCCAT TTACCCGCCA AAGTGCCACA CGAGGCTGTC
GAGAAGTTTA AGCTGCAAAC GCTTGACGAT TTATATACTG CCGTAGGCGC GGGCGACGTG
CGGGTTATGC AAGTGATTAA CTTTATCCAT CACCTTCAGG AACCGCCAGC GCCAGAACCA
GAAATAAGTC CTAAGGTGAA AACCCGTAAA ACGGCAGCGG GGACGGGCAA AAAAGATGCG
GTGGTCGTAC AGGGCGTGGG CCACTTAATG AGCCAATTAG CCAATTGCTG TAAGCCTGTG
CCCGGCGAGC CTATCCTAGG CTACATCACG CAAGGGCGAG GTGTTAGCGT TCATAAAGAG
AGCTGCGATC AGCTGCAGCA CTTGTTGTCA CAGCACCCTG AGCGTCAGAT AGAGGTTAAC
TGGTCAGAAG AACTTAAAGT AGGGTTTGAA ACCGGCATAG ACATATTCTG CCATGATAGA
AATGGTTTAC TGCGTGACAT TACCACTGTG CTTGCCAATG AAAACGTCCC GCTACTAGGG
GTTAATAGCT TAAGTGATAA AAACAGGCAA ACGGCGCTTA TCACGATATC CATTGAAGTG
CAGGATTTAG AAACAGTATC AAAAGTACTG ACAAGATTAA GACAGCTTAA AGGCATTACT
GATGCAAAAC GCAAGCAAAG TTAG
 
Protein sequence
MVSTRKVHEA DRPPFEAWLD SLNLHAETKD KLSAVSSIPE RLLVGQEMVE ILCQLNMDDA 
TLQAALVFPY CEQHALSEDD IHEEFGGEIR DLVVGVRRMD AIKSLHARKV NGSGFAEKSD
EQHIDSIRRM LLAMVEDVRA VVIKMAERIC ALQQVKKADE ETRVMVAREC ASIYAPLANR
LGIGQLKWEL EDLAFRYLHP ITYKQIAKQL DGKRRERAEY INAIVDDLQG LLDKEQIRAE
VYGRPKHIFS IWKKMQKKRL TFEQLFDIRA VRIIAERLQD CYAALGTVHA SYKHLPNEFD
DYIATPKPNG YQSIHTVIVG PESKSVEIQI RTQKMHQDAE LGVAAHWKYK EGSTGKQSGY
DERINWLRRI LAWQEEVAES GDLVEELRSQ VFDDRVYVFT PKGDVIDLPQ GATPLDFAYY
IHSNVGHRCI GAKVNGRIVP FTYLLQSGDQ IEVLTGKEPN PSRDWMHPGL GYVHSSRARA
TIHSYFKKQD RDKNLAAGKE LLERELQRAH LPAKVPHEAV EKFKLQTLDD LYTAVGAGDV
RVMQVINFIH HLQEPPAPEP EISPKVKTRK TAAGTGKKDA VVVQGVGHLM SQLANCCKPV
PGEPILGYIT QGRGVSVHKE SCDQLQHLLS QHPERQIEVN WSEELKVGFE TGIDIFCHDR
NGLLRDITTV LANENVPLLG VNSLSDKNRQ TALITISIEV QDLETVSKVL TRLRQLKGIT
DAKRKQS