Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03401 |
Symbol | |
ID | 6778891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3658625 |
End bp | 3660808 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642756849 |
Product | GTP pyrophosphokinase |
Protein accession | YP_002127687 |
Protein GI | 196158198 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00113456 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCGA CAAGAAAGGT CCACGAAGCC GACCGGCCAC CCTTCGAAGC GTGGCTAGAC AGCCTGAATT TACACGCAGA AACGAAAGAC AAGCTTAGCG CTGTATCGTC TATTCCTGAG CGCTTGTTAG TCGGTCAGGA AATGGTAGAG ATTCTGTGTC AGCTCAATAT GGACGACGCG ACGCTTCAGG CCGCCTTAGT ATTTCCTTAT TGCGAACAGC ACGCGCTAAG CGAAGACGAC ATTCATGAAG AATTCGGCGG CGAAATTCGC GACCTGGTTG TTGGCGTGCG CAGAATGGAC GCTATTAAGT CTTTACATGC CCGCAAAGTA AATGGGTCTG GGTTTGCAGA AAAGTCAGAC GAACAGCACA TTGACAGCAT TCGCCGCATG CTGCTTGCCA TGGTTGAAGA CGTGCGTGCG GTGGTTATTA AAATGGCCGA GCGCATTTGC GCACTGCAAC AGGTTAAAAA AGCGGATGAA GAAACCCGCG TTATGGTGGC TCGAGAATGC GCTAGCATTT ACGCCCCGTT GGCAAACCGC CTAGGCATTG GCCAGTTAAA GTGGGAACTT GAAGACCTCG CCTTTCGCTA CTTGCACCCT ATTACTTATA AACAAATCGC AAAACAGTTA GACGGAAAGC GCAGAGAACG CGCCGAATAC ATCAATGCTA TTGTTGACGA CCTTCAAGGC CTGCTAGACA AAGAGCAAAT CCGTGCTGAG GTATACGGTC GACCTAAGCA TATTTTCAGC ATTTGGAAAA AAATGCAGAA AAAACGGCTT ACGTTTGAAC AGCTATTTGA TATTCGCGCG GTGCGCATTA TTGCCGAGCG GCTACAGGAT TGTTACGCAG CGCTAGGAAC GGTGCATGCT AGCTACAAGC ATTTACCTAA CGAGTTCGAC GATTATATCG CGACCCCAAA ACCCAATGGT TACCAGTCGA TTCATACCGT TATCGTTGGG CCTGAAAGTA AGTCGGTTGA GATTCAAATT CGCACTCAGA AAATGCATCA GGACGCAGAG CTAGGCGTGG CGGCCCACTG GAAGTACAAA GAAGGCAGCA CGGGTAAACA GTCGGGCTAT GACGAGCGCA TAAACTGGTT ACGTCGCATA CTCGCGTGGC AAGAAGAAGT GGCTGAATCT GGCGATTTAG TTGAAGAGCT TCGCAGCCAA GTGTTCGACG ACCGGGTGTA TGTGTTTACG CCGAAAGGGG ATGTGATTGA CTTGCCACAA GGTGCTACGC CTCTTGATTT TGCCTATTAC ATTCACAGTA ATGTGGGCCA CCGCTGCATT GGCGCTAAAG TGAATGGGCG TATAGTGCCC TTTACTTATT TGCTGCAAAG CGGCGATCAA ATAGAAGTGC TTACGGGTAA AGAGCCAAAC CCTAGTCGAG ATTGGATGCA CCCCGGCCTC GGCTACGTGC ACTCATCACG GGCTAGAGCC ACTATTCACT CGTACTTTAA AAAGCAGGAC AGGGACAAAA ACCTTGCTGC AGGTAAAGAG CTTTTAGAGC GTGAATTACA GCGGGCCCAT TTACCCGCCA AAGTGCCACA CGAGGCTGTC GAGAAGTTTA AGCTGCAAAC GCTTGACGAT TTATATACTG CCGTAGGCGC GGGCGACGTG CGGGTTATGC AAGTGATTAA CTTTATCCAT CACCTTCAGG AACCGCCAGC GCCAGAACCA GAAATAAGTC CTAAGGTGAA AACCCGTAAA ACGGCAGCGG GGACGGGCAA AAAAGATGCG GTGGTCGTAC AGGGCGTGGG CCACTTAATG AGCCAATTAG CCAATTGCTG TAAGCCTGTG CCCGGCGAGC CTATCCTAGG CTACATCACG CAAGGGCGAG GTGTTAGCGT TCATAAAGAG AGCTGCGATC AGCTGCAGCA CTTGTTGTCA CAGCACCCTG AGCGTCAGAT AGAGGTTAAC TGGTCAGAAG AACTTAAAGT AGGGTTTGAA ACCGGCATAG ACATATTCTG CCATGATAGA AATGGTTTAC TGCGTGACAT TACCACTGTG CTTGCCAATG AAAACGTCCC GCTACTAGGG GTTAATAGCT TAAGTGATAA AAACAGGCAA ACGGCGCTTA TCACGATATC CATTGAAGTG CAGGATTTAG AAACAGTATC AAAAGTACTG ACAAGATTAA GACAGCTTAA AGGCATTACT GATGCAAAAC GCAAGCAAAG TTAG
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Protein sequence | MVSTRKVHEA DRPPFEAWLD SLNLHAETKD KLSAVSSIPE RLLVGQEMVE ILCQLNMDDA TLQAALVFPY CEQHALSEDD IHEEFGGEIR DLVVGVRRMD AIKSLHARKV NGSGFAEKSD EQHIDSIRRM LLAMVEDVRA VVIKMAERIC ALQQVKKADE ETRVMVAREC ASIYAPLANR LGIGQLKWEL EDLAFRYLHP ITYKQIAKQL DGKRRERAEY INAIVDDLQG LLDKEQIRAE VYGRPKHIFS IWKKMQKKRL TFEQLFDIRA VRIIAERLQD CYAALGTVHA SYKHLPNEFD DYIATPKPNG YQSIHTVIVG PESKSVEIQI RTQKMHQDAE LGVAAHWKYK EGSTGKQSGY DERINWLRRI LAWQEEVAES GDLVEELRSQ VFDDRVYVFT PKGDVIDLPQ GATPLDFAYY IHSNVGHRCI GAKVNGRIVP FTYLLQSGDQ IEVLTGKEPN PSRDWMHPGL GYVHSSRARA TIHSYFKKQD RDKNLAAGKE LLERELQRAH LPAKVPHEAV EKFKLQTLDD LYTAVGAGDV RVMQVINFIH HLQEPPAPEP EISPKVKTRK TAAGTGKKDA VVVQGVGHLM SQLANCCKPV PGEPILGYIT QGRGVSVHKE SCDQLQHLLS QHPERQIEVN WSEELKVGFE TGIDIFCHDR NGLLRDITTV LANENVPLLG VNSLSDKNRQ TALITISIEV QDLETVSKVL TRLRQLKGIT DAKRKQS
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