Gene MADE_03394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03394 
Symbol 
ID6776757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3652407 
End bp3653078 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID642756842 
Productputative transcriptional activator, TenA family 
Protein accessionYP_002127680 
Protein GI196158191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCT ATCAGCAACT TCAAAGCAAC ACCGAACATG CCAGACAGTC ATTCTTACAG 
GCGCCGATTA TACAACGCTG CTTTAACGGT GATTTTAACC TAAACGACTA TATTGCCTTT 
CTTCAACAGG CCTATCATCA CGTTAAGTTT ACTGTTCCAC TGCTTATGGC TACAGGTGCC 
AAACTCAACG AAGATAAGGA ATGGCTAAGA GAAGCAATTG GTGAATACAT TGAAGAAGAA 
ATGGGTCACC AGGAGTGGAT CCTTAACGAC CTTGCAGCCT GTGGCGTTGA TAAAGAAAAG 
GCGAGGAATA GTCAGCCTGC ACCCGCCACC GAATTAATGG TTGCCTATGC TTTTGATGCA 
ATAGCTCGCA AAAGTCCACT GTATTTCTTC GGCATGGTAT TCGTTTTAGA GGGCACAAGT 
ATCGCGCTTG CCGACGCCGC TGCAAAACAA ATCAAAGACA AGTTATCACT GCCTAAATCA 
GCGTTTAAAT ACCTTACCTC TCACGGTGCG CTAGACCAAG AGCACATTGT TTTCTTTGAA 
GGGCTTATGA ACAAAATTAC CGCCCCCAAA GAGCAACAAA TGATCATTCA CAGCGCGAAC 
ATGTTTTATC GCTTATACGG AGATATCTTT CGCGAATTAA CACCCGAACA CGGCTTGGAA 
CAGGTTGCTT AA
 
Protein sequence
MNFYQQLQSN TEHARQSFLQ APIIQRCFNG DFNLNDYIAF LQQAYHHVKF TVPLLMATGA 
KLNEDKEWLR EAIGEYIEEE MGHQEWILND LAACGVDKEK ARNSQPAPAT ELMVAYAFDA 
IARKSPLYFF GMVFVLEGTS IALADAAAKQ IKDKLSLPKS AFKYLTSHGA LDQEHIVFFE 
GLMNKITAPK EQQMIIHSAN MFYRLYGDIF RELTPEHGLE QVA