Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03385 |
Symbol | |
ID | 6775926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3643709 |
End bp | 3644944 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756833 |
Product | sensor histidine kinase |
Protein accession | YP_002127671 |
Protein GI | 196158182 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.367883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTTTTA GCGCAGCCCT TCATGGCTAT CGCGCGACTC TAAATATCTC AAGTGCACTT TTAGACGACG AATTGATTGA ACTCTCCCAC GCCATTGCTT ACTTCGATAG TAATCAACAG GAAGAAGAGC ATGAACTGTT GTTTCAGATT TGGAAGAGGG GCGAACTAAT AAGCACCTCT TCGGCTGAAC TCACTACCCC AATAGCCGCC TTCACACCCG GTTTTTCTGA AGTCAACGCG TTAGGCACTC GTTGGCGTGT GTTTGCTAAG TACCAGGAAC AAACTGCCAC TTGGTACATG GTCGCCCAGC CGGTAAGCAA CCGCTTTATG CTTACCGATT CACTCACCGT AGCGGCCATT ACCCCTTTCA TATTGAGTGT GCCTTTACTC GCTCTTATTC TGTTCTTTGG CATAACATGG GGCTTGTCAC CTTTAAAACA TTTATCTAGA TTGCTAGCAA AGCGAAAAGG AAACGACTTT TCTGTCATTG CAATGCATAG AGAACCAAGT GAACTTACAC CTGTGGTTTC CACACTGAAT ACCATGTTCA ATCGTCTTAA CGCTGCATTT GAGCGTGAAC AACAGTTTGC TTCCAATGCG GCGCACGAAC TTAGAACGCC TTTAAGTGTT ATGAAAATCA ATATTCACAA CATCGCAAAC GAATTGGGCG AAAAGGGTGA AGCACTTAAA ACACTTAAGG CTGATACTGA CAGAATGATC CACGCAGTAA ACCAGTTTCT CTTGCTAACG CGAACAAGCC CAGAGACCTT TGTTGAACAA CGAGAGCCTA TTAATGTGCA CCATGTCGCT CAAGAGGTTA TTAGTGACCT TTATGGAAAA ATAGAAAATA AAGCACAGGA AATTGCGCTG GAAGGAGATG AGGTTTGGCT TCAAAGCTCG CAGTTTATGC TATATACGCT GCTTCAGAAT TTGGTAAGTA ATGCGAGTAA CTATTCGCCT AAAAATGCGC AAATTTTAAT TAAAGTAGAA TGTCATCACC GTGGTGTCTC ATTAAGTGTA TGCGATTCTG GCCCTGGCAT TCCCGCTGAT CAACGACCTG AGGTTATAAA ACGGTTTCAA AGGGGGCCTA CGAGTAAACC CACTTCGGGG AGTGGACTAG GTCTCGCAAT TGTTGCGCAA GTTGTTGCTT TACATAATGC AGAACTGACA CTGCACGAAA GCTCGATGGG CGGTTTAGAA GTAAGGGTGA ATTTTTCAAA TGACTTCGTA CTTTAA
|
Protein sequence | MIFSAALHGY RATLNISSAL LDDELIELSH AIAYFDSNQQ EEEHELLFQI WKRGELISTS SAELTTPIAA FTPGFSEVNA LGTRWRVFAK YQEQTATWYM VAQPVSNRFM LTDSLTVAAI TPFILSVPLL ALILFFGITW GLSPLKHLSR LLAKRKGNDF SVIAMHREPS ELTPVVSTLN TMFNRLNAAF EREQQFASNA AHELRTPLSV MKINIHNIAN ELGEKGEALK TLKADTDRMI HAVNQFLLLT RTSPETFVEQ REPINVHHVA QEVISDLYGK IENKAQEIAL EGDEVWLQSS QFMLYTLLQN LVSNASNYSP KNAQILIKVE CHHRGVSLSV CDSGPGIPAD QRPEVIKRFQ RGPTSKPTSG SGLGLAIVAQ VVALHNAELT LHESSMGGLE VRVNFSNDFV L
|
| |