Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03356 |
Symbol | |
ID | 6778655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3613001 |
End bp | 3613342 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756804 |
Product | Sigma-54 factor |
Protein accession | YP_002127642 |
Protein GI | 196158153 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAC TGCAAGGGAA TGCAGCGGAA GACAAGGCCT GTGAATATTT ACTTCAACAA GGCCTCACTC TTCGTTGTCG CAACTACCAT ACAAGGCGTG GTGAACTCGA TATTGTAATG CAAGACGGGA ATACCATAGT GTGTATTGAA GTGAAATATC GAAAGCAAAA TCGCTTTGGC AGTGCAGTGG AATTTGTCAC GGCCAAAAAA CTTCAGCGAA TTCAGGCTGC GTTTGGTTTC TATTTGTTAG ATAATGGTCT AAATCCAGCG TCTACCCCCT TAAGGATAGA CGTTATTGCC ATAGACGGAG ACAACCTCGA ATGGCTGAAG AGCGTAGGCT AA
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Protein sequence | MSKLQGNAAE DKACEYLLQQ GLTLRCRNYH TRRGELDIVM QDGNTIVCIE VKYRKQNRFG SAVEFVTAKK LQRIQAAFGF YLLDNGLNPA STPLRIDVIA IDGDNLEWLK SVG
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