| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03329 |
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| Symbol | |
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| ID | 6777188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3586545 |
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| End bp | 3589049 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756777 |
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| Product | putative excinuclease ABC subunit A |
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| Protein accession | YP_002127615 |
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| Protein GI | 196158126 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAGG ATGAAGGGCG AATTCAGATA CGCGGTGCTC GCGTACATAA CTTAAAGAAT
ATCAACGTTG ATATACCTCG AGATTGCGTT GTCGTTTTTA CCGGCGTATC TGGCTCAGGC
AAGTCCTCGT TGGCGTTTGG TACGCTGTAC GCCGAGGCGC AGCATCGTTA TTTAGATTCC
ATATCGCCCT ACGCCCGGCG TCTAATAGAA CAAGTCGAAA AGCCAGAAGT TGATGCCTTG
GAGGGATTAC CGCCAGCCGT TGGCTTACAT CAGCGTCGCC AAGCGCCGTC AGTGCGTTCA
TCTATAGGCA GTATAACTAC CCTTTCTAAC AGCCTGCGTA TGCTTTATTC CCGAGCAGGG
GATTACCCAG AAGGCCAAGC TATTATTTAT GCAGACGGCT TTTCACCCAA CACACCTGAA
GGCGCATGCG AGCGGTGCGA CGGTATCGGT AAAGTGTTTG ATACTCAAGC TCAGCTTTTA
GTGCCTGACG ATACTCTAAC CATTCGAGAA GGGGCTGTGG CGGCTTGGCC CGGTGCGTGG
CAAGGTAAAA ATCTTGTCCG GGTGCTGCTG TCTCTTGATA TTGACGTGGA TGTGCCGTGG
CGTGAATTGC CGAAAGCGAC GCGCGATTGG ATCTTATATA CAGACGAGGC GCCACAGATG
CCTGTCTATC GAAATTACAA CCTAGAACAA ACGCGCAAAG CGCTAGCAGA GGGCGAACCT
GCTAGCTATA AGGGGAAGTT TATAAGTGCC AGGCGTCACG TTTTAGATAC CTTTAAAACC
TCACAAAAAG AAAAAATTAA GCAGCGTATT TCTCGTTTCC TCTCCGTTAC ACCGTGCCCC
CGTTGTCATG GTAAAAAGCT TAAGAAAAAA GCCCTTAACG TTACGGTAGA GGGTGTCGAT
ATTATTGACT TTTCAAGGCT ACCGCTGCGC GAGGTTAATG AAAAAATGAA TAAGCTGCGG
GGTTCAGTAG CAGGTAATAC CTCAGAAAGG GCACAAGTCA TAAGAAACAT AGCGGACGAT
GTCATCGATA GAATTAAACC TATTATCGCG CTAGGTCTGC ATTACCTTTC ATTAGATAGA
AGCACTACTA CTATTTCGGT TGGCGAGTTA CAGCGACTGC GCCTCGCTAC TCAGCTAAAA
TCCAATTTAT TTGGCGTGGT TTATGTTATG GATGAACCTT CGGCTGGGTT GCACCCTCGC
GATGTCGAGT CCTTAGTTAA TGCGCTTCAT GATATTACTA AAGCGGGTAA TTCTCTGTTG
GTTGTTGAGC ATAACCCCTA TGTGATTAAA GGGGCTAAGT GGGTAGTAGA TATTGGCCCT
AGTGCCGGTA AAGAGGGTGG TGAGCTGATA TTCAGTGGGC CAGTTGATGA ACTCGCGAAG
GTAGAGACTT CGCCAACCGC AGAATTTGTT TTCAATGACA AACCCCTCGT ATCAAGAGAA
AAATGTAACT CATCATTGAC GCTAAGTCTT AAAAACGTGA GCAGAAACAA TGTAAACAAC
ATTGATATTG ATATTCCCCT TGGTGTTATG ACGACGGTTA CTGGCGTTTC AGGCTCTGGA
AAGTCGAGTC TTATTAGCCA AGCATTGGTG GAGCTAGTAA AAGAGGGATT GGGTAGCGTT
AAAGATAAAA CTGACGGTGA AGTTAATGAG GTCGCGTTAC TTTCATCCGA AGATAAGGTT
ACCCAAGAGG GCTTTATCGC CAGCGGGTCA GATAATATAA GTCGCTTAGT GGTTGTAGAT
CAGTCTCCTA TAGGCAGAAC ACCACGCTCG ACGCTCGCAA CCTACACGGG CATGTTCGAC
CAAATCAGAC GCTTATTTGC TACCACTGAC GACGCGAAAA GCCGTGAGTA TGATGCCGGT
CATTTTTCTT TTAACGTGAC CAAAGGCCGA TGTCCCAACT GTGAAGGACT AGGTGTAGTG
TCGGTAGAAT TACTATTTAT GCCCAGTGTG TATTCACCTT GTTCGGTCTG TAATGGTTCA
CGGTTTAAGG ATGAGGTTTT AGATGTTCAC TATAAAAAAC ACTCTATTGC CGATATTTTA
TCTCTTACAG TCAACGAGGC GCAGGATGTC TTTGAGGATA ACAGCGCAGT TTTGCGAGGG
CTTAAAACAC TAATTAACGT TGGCCTTGGT TATCTTACAC TGGGGCAAAG TGCCACCGAG
CTATCGGGAG GGGAGGCCCA GCGTATTAAG TTGGCCTCTG AACTTAAGCG TGCGCAAAAC
AATAACACCC TTTATGTGCT GGACGAACCA ACCACAGGTT TGCACCTTTC AGATACTGCA
CTGCTTTTGG AGCACTTAAG TACGCTTGTG GATAGCGGTA ATACCGTGGT GATGGTTGAG
CATAATATGC AAGTGGCCGC CGCTAGTGAC CACGTGATTG ATATGGGGCC GGGAGCTGGC
GAAGACGGTG GACAAATCGT GGCGTGGGGC ACACCAAAAG ACGTTGCGAA AAATAAGAAA
AGCGCAACTG CGCCCTTTTT AAAGCAAGCT TGCAAAATAA ATTAA
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| Protein sequence | MHKDEGRIQI RGARVHNLKN INVDIPRDCV VVFTGVSGSG KSSLAFGTLY AEAQHRYLDS
ISPYARRLIE QVEKPEVDAL EGLPPAVGLH QRRQAPSVRS SIGSITTLSN SLRMLYSRAG
DYPEGQAIIY ADGFSPNTPE GACERCDGIG KVFDTQAQLL VPDDTLTIRE GAVAAWPGAW
QGKNLVRVLL SLDIDVDVPW RELPKATRDW ILYTDEAPQM PVYRNYNLEQ TRKALAEGEP
ASYKGKFISA RRHVLDTFKT SQKEKIKQRI SRFLSVTPCP RCHGKKLKKK ALNVTVEGVD
IIDFSRLPLR EVNEKMNKLR GSVAGNTSER AQVIRNIADD VIDRIKPIIA LGLHYLSLDR
STTTISVGEL QRLRLATQLK SNLFGVVYVM DEPSAGLHPR DVESLVNALH DITKAGNSLL
VVEHNPYVIK GAKWVVDIGP SAGKEGGELI FSGPVDELAK VETSPTAEFV FNDKPLVSRE
KCNSSLTLSL KNVSRNNVNN IDIDIPLGVM TTVTGVSGSG KSSLISQALV ELVKEGLGSV
KDKTDGEVNE VALLSSEDKV TQEGFIASGS DNISRLVVVD QSPIGRTPRS TLATYTGMFD
QIRRLFATTD DAKSREYDAG HFSFNVTKGR CPNCEGLGVV SVELLFMPSV YSPCSVCNGS
RFKDEVLDVH YKKHSIADIL SLTVNEAQDV FEDNSAVLRG LKTLINVGLG YLTLGQSATE
LSGGEAQRIK LASELKRAQN NNTLYVLDEP TTGLHLSDTA LLLEHLSTLV DSGNTVVMVE
HNMQVAAASD HVIDMGPGAG EDGGQIVAWG TPKDVAKNKK SATAPFLKQA CKIN
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