| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03326 |
|---|
| Symbol | |
|---|
| ID | 6777122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3581149 |
|---|
| End bp | 3582432 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642756774 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_002127612 |
|---|
| Protein GI | 196158123 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGG TAAATTTAAA AGATTCATCG GACACAGCGA GCTTTGCTGA AGCGGTAAAG
CGTGGTTTAG GTAAGAACCA AGGGCTTTAT TTTCCAGAGC ATATTCCTAC CTTAGACAAT
ATTGACGAAT TGCTGGAAAA GCCATTTGTA GAGCGCAGCA TTGATGTGCT TCGTGCGCTT
ATTGGAGACG AGCTTAATAA CGGCGAGCTT GAAGAAATTG TCAAAACAGC TTTCGCATTT
GGTGCGCCGG TTGAACAGGT TAACGATAAC GTTTATAGCC TAGAGCTTTT CCACGGCCCA
ACCCTTGCGT TTAAAGACTT TGGTGGCCGT TTTATGGCAC AAACGCTCTC GCGTATAAGC
GAAGGTAAGC CTGTGACTAT CCTAACCGCC ACGTCAGGCG ATACAGGTGC AGCTGTTGCT
CATGCGTTCC ACGGTATCGA CAATATCAAC GTGGTTATCT TGTTCCCTAA GGGCAAGATC
AGCGCGTTGC AAGAAAAGCT TTTCACTACG TTGGGCGGTA ATATTCACAC TGTAGCAATC
GAATCAGATT TTGATGCATG CCAGTCCCTT GTGAAAACTG CGTTTGACGA CCCAGATGTG
CGTGAAGGTC TTCACCTCAA CTCTGCGAAC TCCATTAATA TAAGTCGTTT ACTGGCACAG
GTATGTTACT ACTTTGAAGC GGTTAGCCAA CTGCCCAAAG AGAAGCGCGA CCAGCTTGTT
ATTTCGGTAC CTAGCGGTAA CTTCGGTAAT CTTACGGCAG GCATGATCGC TAAATCGTTA
GGCCTACCGA TTAAACGCTT CATTGCCGCA ACTAACTTAA ACGATACCGT GCCTCGTTAC
TTAAAAACGG GGGAGTGGGA CCCGAAAGCG ACGGTTGCCA CTATGTCGAA CGCAATGGAT
GTTAGCCAGC CGAACAACTG GCCGCGTATT GAAGCGTTAA TTGAGCGTGG TTACATCGAC
AAAGCGTGCC TTAAGGGTGA AATGGTTGAT GAAGAATATA CTCAGCTTGC CATGCGCCAG
CTAGCGCAGC AAGGCTACAC CAGTGAGCCA CACGCTGCTA TTGCCTATCG CGCGGTAAGC
CACGACCTGC AAGACGGTGA AATTGGCCTG TTTTTAGGTA CTGCTCACCC AGCTAAGTTC
AGAGAAACGG TAGAAAACGT ATTGGGTAAC CCAATAAGCT TGCCAAAGCC GTTAGCAGAC
GTAGCGGGCG AAGACAGCCT AGCGGTAGAC TTACCTGCGT CCTATGATGC GCTTAAGCAG
CACATGATGA ACTTGCTTAA GTAA
|
|---|
| Protein sequence | MELVNLKDSS DTASFAEAVK RGLGKNQGLY FPEHIPTLDN IDELLEKPFV ERSIDVLRAL
IGDELNNGEL EEIVKTAFAF GAPVEQVNDN VYSLELFHGP TLAFKDFGGR FMAQTLSRIS
EGKPVTILTA TSGDTGAAVA HAFHGIDNIN VVILFPKGKI SALQEKLFTT LGGNIHTVAI
ESDFDACQSL VKTAFDDPDV REGLHLNSAN SINISRLLAQ VCYYFEAVSQ LPKEKRDQLV
ISVPSGNFGN LTAGMIAKSL GLPIKRFIAA TNLNDTVPRY LKTGEWDPKA TVATMSNAMD
VSQPNNWPRI EALIERGYID KACLKGEMVD EEYTQLAMRQ LAQQGYTSEP HAAIAYRAVS
HDLQDGEIGL FLGTAHPAKF RETVENVLGN PISLPKPLAD VAGEDSLAVD LPASYDALKQ
HMMNLLK
|
|---|
| |