| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03321 |
|---|
| Symbol | |
|---|
| ID | 6777118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3577066 |
|---|
| End bp | 3578025 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642756769 |
|---|
| Product | transaldolase B |
|---|
| Protein accession | YP_002127607 |
|---|
| Protein GI | 196158118 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00874] transaldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC AGTTAGCTTC ATTACGTGAT ATCACCACCG TAGTTGCCGA CACGGGCGAC
ATCGATGCCA TTAAAAAATA TCAGCCGGTT GATGCCACTA CCAACCCGTC GCTACTTTTG
AAAGCGGCTG GTCTTCCTCA ATATGCAAGC CTAATTGATG ACGCTGTAGC ATGGGCAAAG
CTGCAGTCTA ACGATGCAGA ACAGCAACTA ACAGACGCGT CTGACAAGCT TGCCGTGGCT
ATTGGTAAAG AAATTTCTGG CACTATCCCG GGCCGAATTT CTACCGAAGT TGATGCTCGC
CTATCGTTTG ATACCGCAGC AACCATCGAA AAAGCAGAGC GCTTAGTTCA GCTTTATGAA
GACGCTGGCA TCGATAAGTC ACGTATCTTA ATTAAAATTG CATCAACGTG GGAAGGTATT
CAAGCGGCAG AAGCACTAGA GAAAAAAGGT ATTCAATGCA ACCTTACTTT GCTATTTAGC
TTTGCCCAAG CTCAAGCGTG TGCCGAAGCG GGCGTATACC TTATTTCGCC TTTCGTAGGC
CGTATTTTAG ACTGGTACAA GAAAGCAACC GGTACCGAAT CTTACGCACC AGATGAAGAC
CCAGGTGTAG TATCTGTAAC GAAAATTTAC AACTACTACA AAGAACATGG CTACAAGACG
GTAGTGATGG GCGCAAGCTT CCGTAACATT GGCGAAATTC AGGCGCTAGC GGGCTGCGAC
CGCTTAACGA TAAGCCCTGC ACTACTTGAA GAATTGGCAA ACGAGCCAGG CGACTTGGAA
GTGAAACTTA AAGACAACGA CGCAACCAAA ACACCAGGTG AGCGTTTAAC TGAAAGCGAA
TTCCGCTGGG CAATGAACGA AGATGCGATG GCAACTGAAA AGCTATCTGA AGGCATTCGC
AACTTTGCTG CCGACCAAGA AAAACTTGAA GCTACGCTTC GCGAAAAACT AAGCGCATAA
|
|---|
| Protein sequence | MSNQLASLRD ITTVVADTGD IDAIKKYQPV DATTNPSLLL KAAGLPQYAS LIDDAVAWAK
LQSNDAEQQL TDASDKLAVA IGKEISGTIP GRISTEVDAR LSFDTAATIE KAERLVQLYE
DAGIDKSRIL IKIASTWEGI QAAEALEKKG IQCNLTLLFS FAQAQACAEA GVYLISPFVG
RILDWYKKAT GTESYAPDED PGVVSVTKIY NYYKEHGYKT VVMGASFRNI GEIQALAGCD
RLTISPALLE ELANEPGDLE VKLKDNDATK TPGERLTESE FRWAMNEDAM ATEKLSEGIR
NFAADQEKLE ATLREKLSA
|
|---|
| |