| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03315 |
|---|
| Symbol | |
|---|
| ID | 6777170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3573839 |
|---|
| End bp | 3574942 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642756763 |
|---|
| Product | MFS permease |
|---|
| Protein accession | YP_002127601 |
|---|
| Protein GI | 196158112 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTAC TGCCCTACTT CGCGGAAGAT TTTGGTATTA CTGAAAACGT TGCAGGTCAT
GCAATTAGTG CCTATGCCAT TGGCGTTGTA GTAGGCGCAC CGCTTATCAC TATCTTCTTT
TCTCGCCTTG CTAGGCGCAC CATGCTTATT TCAATGATGA TATTTTATGC CGGTGGGAAT
CTGCTAACAG CACTAGCATG GTCAGAATGG ACAATGAATA TAGCGCGCTT TATTGCTGGC
CTTCCTCACG GTGCCTATTT CGGTATTGCC ATGCTTTTTG CAGCTGACAT TGCGGGTAAA
AATAAACGGG CCCAGGCGGT GAGTAACGTC ATCATGGGTT TAGCTATTGC TAATATTATT
GGGGTGCCGT CAATTAGCGG TATCGGGCAA ATGTTTGGCT GGAGAACCGG CTTTTTCATG
ATTTCTGCCT TTGCACTAGC GACCGCTTTA ATGGTCTGGA AAACTGCACC TTACCGCGGT
CCAAACCCAG ATGCCAAGCC TCTAACTGAA CTCAAAGCGC TAAAAAATAA AGACGTACTG
CTGGTATTGC TCATGGGCGC TATTGGCTTT GGGGGCATGT TCTCGGTGTA CTCCTATTTT
AGTGCCTCGT ACTTAAACAC GACCTCGGCA CCCGAATGGG GAATTTCTGC AACCTTGCTT
ATCTATGGCA TTGGCGTGAC CCTGGGCAAC ATTATCGCTG GGCGCTATTC TGAAGGCCGA
CTGCTAACTT CAGCCATCGT TTTTCAGGTT CTACTTGGTT TATCTGCAGC CGCGTACGCC
GCGTCTATGG GCCAGCCATA TCTAATGGCA GCCTCATTGT TTTTCATCGG CATCGGGGGC
GGTATGGTAG TGCCACTGCA AACCCGTTTA ATGGATGTGG CGGGCGAAGC GCAAACCTTA
GCAGGAGCCA TGAACCATGC CGCTTTCAAT ACGGCAAACG CCTTGGGCCC TTGGCTGGCG
GGTATGACGT TGTCAGCCGG CTATGGTTAT GCTTCAACAG GTTGGGTAGG TTTAGCGCTG
GCCGGTGGTG GCGTGTTGGT ATGGCTAGCC ATTGTTATGA CTGCACGCAA TACCCAAGTA
CAGACAGTAA CCGTATCTGG TTGA
|
|---|
| Protein sequence | MGLLPYFAED FGITENVAGH AISAYAIGVV VGAPLITIFF SRLARRTMLI SMMIFYAGGN
LLTALAWSEW TMNIARFIAG LPHGAYFGIA MLFAADIAGK NKRAQAVSNV IMGLAIANII
GVPSISGIGQ MFGWRTGFFM ISAFALATAL MVWKTAPYRG PNPDAKPLTE LKALKNKDVL
LVLLMGAIGF GGMFSVYSYF SASYLNTTSA PEWGISATLL IYGIGVTLGN IIAGRYSEGR
LLTSAIVFQV LLGLSAAAYA ASMGQPYLMA ASLFFIGIGG GMVVPLQTRL MDVAGEAQTL
AGAMNHAAFN TANALGPWLA GMTLSAGYGY ASTGWVGLAL AGGGVLVWLA IVMTARNTQV
QTVTVSG
|
|---|
| |